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NECEvent2014_8_3_scaffold_1372_8

Organism: NECEvent2014_8_3_Clostridium_paraputrificum_30_11

near complete RP 51 / 55 MC: 1 BSCG 50 / 51 ASCG 14 / 38 MC: 1
Location: 3924..5561

Top 3 Functional Annotations

Value Algorithm Source
DNA-directed RNA polymerase subunit beta {ECO:0000256|HAMAP-Rule:MF_01321}; Short=RNAP subunit beta {ECO:0000256|HAMAP-Rule:MF_01321};; EC=2.7.7.6 {ECO:0000256|HAMAP-Rule:MF_01321};; RNA polymerase su similarity UNIPROT
DB: UniProtKB
  • Identity: 91.4
  • Coverage: 546.0
  • Bit_score: 1017
  • Evalue 9.50e-294
rpoB; DNA-directed RNA polymerase, beta subunit (EC:2.7.7.6) similarity KEGG
DB: KEGG
  • Identity: 91.6
  • Coverage: 546.0
  • Bit_score: 1012
  • Evalue 6.20e-293
DNA-directed RNA polymerase subunit beta n=1 Tax=Clostridium chauvoei JF4335 RepID=S6EUU2_9CLOT similarity UNIREF
DB: UNIREF100
  • Identity: 91.4
  • Coverage: 546.0
  • Bit_score: 1017
  • Evalue 6.80e-294

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Taxonomy

Clostridium chauvoei → Clostridium → Clostridiales → Clostridia → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 1638
ATGGTACATCCTGTCCAAGTTGGGAAAAGAACAAGAATGAGTTTTGGTAAGGTTAAAGACGTAACCGAAATGCCAAATCTAATTGAAGTACAATTAGATTCGTATCAGTGGTTTTTAAGAGAAGGGCTTCATGAGGTTTTTGATGATGTCAATCCGATAAGCAACTTTACTGGTAATCTAGTACTTGAATTCGTAGACTATAAGCTTGATATGGATAATATTAAGTATTCAGTGGAAGAGTGTAAGGAAAGAGACGCTACTTATGCTGCACCACTAAAGGTTTCTGTAAGATTACAGAACAATGAAACAGGAGAAATAAAAGAACAAGAAGTCTTCATGGGTGATTTCCCATTAATGACTGAACAAGGAACTTTTATTATTAATGGTGCTGAAAGAGTAATAGTCAGCCAATTAGTAAGATCTCCAGGTGTATATTACAGTTATAGTAGAGATAAGAGTGGTAAAAAGCTGTTTTCTTCTACAGTAATTCCAAACAGAGGAGCTTGGTTAGAATATGAAACTGACTCTAATGACGTAATATATGTAAGAATTGATAAGACTAGAAAGCTACCAATCACTATTTTAGGAAGAGCAATGGGATTTGGAAGTGATCAAGAATTATTAGATTACTTTGGAGAAGAAGAAAGATTCAAGGCAACAATTGAAAAAGACAATACTAAAACGAAAGAAGAAGCACTATTAGAAATCTATAAAAGATTAAGACCAGGTGAACCACCTACAGTAGATAGTGCAGTATCTTTAATTGATTCTTTATTCTTTGATGCAAAAAGATATGATTTGTCTAGAGTAGGTAGATATAAGTTCAACAAGAAACTTGCATTAAACTTAAGAATTGCAAATCAAATAGCTGCTAATGACATTATTAATCCATCAACTGGAGAAATAATGGTTGAAAGCGGCCAAAAAATTAGTAGAACAATTGCTGAAGAAATTAGAAATGTAGGAATAAATTCAGTTGATGTTTTAGTGGAAGATAGAGTTGTAAGAGTAATCGGAAATAACTTTGTTGATATAACTAAGCATGTTAACTTTGATGTAACAGACTTAAACATTAAGGAATATGTACATTACCCTACATTAAGAGAAATTTTAGATAATTACTCTGATGAAGATTCAATAAAAGAAGAAATCAAGAAAAATATCAATAAATTAATTCCTAAGCATATTATAAGAGATGATATTTTTGCGACTATTAGTTACGAAATTGGATTGGCTTATAATATAGGATATGTTGACGATATTGATCATCTTGGAAATAGAAGAATTAGATCAGTTGGTGAATTACTACAAAACCAATTTAGAATTGGTTTATCAAGAATGGAAAGAGTAGTTAAAGAAAGAATGACTATTCAAGATCAAGAAGCAATTACTCCTCAAATGTTAATAAACATTAGACCAGTAGCTGCTGCTATTAAAGAATTCTTTGGTAGTTCTCAATTATCACAATTCATGGATCAGATTAACCCACTTTCAGAATTAACTCACAAGAGAAGATTATCTGCTCTTGGACCAGGTGGTTTATCAAGAGAAAGAGCTGGTTTTGAAGTTAGAGACGTTCACCATTCTCATTATGGAAGAATGTGTCCTATCGAGACTCCAGAAGGACCTAACATAGGT
PROTEIN sequence
Length: 546
MVHPVQVGKRTRMSFGKVKDVTEMPNLIEVQLDSYQWFLREGLHEVFDDVNPISNFTGNLVLEFVDYKLDMDNIKYSVEECKERDATYAAPLKVSVRLQNNETGEIKEQEVFMGDFPLMTEQGTFIINGAERVIVSQLVRSPGVYYSYSRDKSGKKLFSSTVIPNRGAWLEYETDSNDVIYVRIDKTRKLPITILGRAMGFGSDQELLDYFGEEERFKATIEKDNTKTKEEALLEIYKRLRPGEPPTVDSAVSLIDSLFFDAKRYDLSRVGRYKFNKKLALNLRIANQIAANDIINPSTGEIMVESGQKISRTIAEEIRNVGINSVDVLVEDRVVRVIGNNFVDITKHVNFDVTDLNIKEYVHYPTLREILDNYSDEDSIKEEIKKNINKLIPKHIIRDDIFATISYEIGLAYNIGYVDDIDHLGNRRIRSVGELLQNQFRIGLSRMERVVKERMTIQDQEAITPQMLINIRPVAAAIKEFFGSSQLSQFMDQINPLSELTHKRRLSALGPGGLSRERAGFEVRDVHHSHYGRMCPIETPEGPNIG