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NECEvent2014_8_3_scaffold_1444_2

Organism: NECEvent2014_8_3_Clostridium_paraputrificum_30_11

near complete RP 51 / 55 MC: 1 BSCG 50 / 51 ASCG 14 / 38 MC: 1
Location: 858..1103

Top 3 Functional Annotations

Value Algorithm Source
Protein hfq n=1 Tax=Clostridium sp. 7_2_43FAA RepID=V9H2T6_9CLOT similarity UNIREF
DB: UNIREF100
  • Identity: 81.8
  • Coverage: 77.0
  • Bit_score: 132
  • Evalue 2.30e-28
RNA-binding protein Hfq {ECO:0000256|HAMAP-Rule:MF_00436, ECO:0000256|SAAS:SAAS00067493}; TaxID=457396 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source=" similarity UNIPROT
DB: UniProtKB
  • Identity: 81.8
  • Coverage: 77.0
  • Bit_score: 132
  • Evalue 3.20e-28
hfq; RNA chaperone Hfq similarity KEGG
DB: KEGG
  • Identity: 75.9
  • Coverage: 79.0
  • Bit_score: 129
  • Evalue 5.40e-28

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Taxonomy

Clostridium sp. 7_2_43FAA → Clostridium → Clostridiales → Clostridia → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 246
ATGAATAAGCAACAAAATAACCTACAAGATATTTTCTTAAATAATGCAAGAAAAAATAAGATATCAGTTGTAATATACTTAACTAATGGATTTCAATTAAAAGGTATTGTTAAAGGTTTTGATCCCTTCACTGTAGTATTAGACCAAGAAGGTAAGCAAATGCTTATATATAAACATGCAATTACAACAGTAACTCCAGCAAAACCAATTTTATTTACAGGTATGGAAAACGAAAATGATCTTTAA
PROTEIN sequence
Length: 82
MNKQQNNLQDIFLNNARKNKISVVIYLTNGFQLKGIVKGFDPFTVVLDQEGKQMLIYKHAITTVTPAKPILFTGMENENDL*