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NECEvent2014_8_3_scaffold_1462_6

Organism: NECEvent2014_8_3_Clostridium_paraputrificum_30_11

near complete RP 51 / 55 MC: 1 BSCG 50 / 51 ASCG 14 / 38 MC: 1
Location: comp(4363..5118)

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase sigma factor n=1 Tax=Clostridium chauvoei JF4335 RepID=S6F8E7_9CLOT similarity UNIREF
DB: UNIREF100
  • Identity: 85.7
  • Coverage: 251.0
  • Bit_score: 433
  • Evalue 1.90e-118
  • rbh
RNA polymerase sigma factor {ECO:0000256|RuleBase:RU000715}; TaxID=1351755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium chauvoei JF4335. similarity UNIPROT
DB: UniProtKB
  • Identity: 85.7
  • Coverage: 251.0
  • Bit_score: 433
  • Evalue 2.70e-118
sigF; sporulation sigma factor SigF similarity KEGG
DB: KEGG
  • Identity: 83.7
  • Coverage: 251.0
  • Bit_score: 418
  • Evalue 1.80e-114

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Taxonomy

Clostridium chauvoei → Clostridium → Clostridiales → Clostridia → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 756
ATGGAGAAAGGGAATTTTAAACGAGAGGAATACAATTATGATGATAACTCTCAGCTGCTTCCATTAGCTAAGGCTGGAGATGAAGTAGCTATGAATAGACTTATAGAAATGAACCTTCCACTTGTATCTTCATTAAGTAAAAAGTTTTTAAATAGAGGATATGATTATGAGGATATATTTCAAATTGGCTCTATAGGGTTAGTCAAAGCAATAAAAAACTTTGATGCATCATTTAATGTGAAGTTTTCTACTTATGCAGTTCCAATGATTGTAGGGGAAATCAAGAGATTTCTAAGAGATGACGGGATGATAAAAGTAAGTAGAAATATTAAGAGTCTTGCAAGAAAGATTCATTTCGATAAGGAAGAATTAACGAAACAGCTAGACAGAGAACCAACAATTGAGGAACTATCTGAGTATTCAGGTATAGAAAAAGAAGATTTAGTTTTTGCTGTTGAATCAGCATCTAGTTTACAATACTTATATGATACTATACACCAAGATGATGGAGCACCTGTATTGCTTATAGATAAGTTAAGTGAAAAAGGTGTAGAAGATAACGATATGATTGATAAAATTGCACTTAAAGAAGCATTAAGGTCTTTAGATGAGAAGTCTAGACAAATAATTATGCTTAGATATTTTAAAGATAAAACTCAAGTGCAAGTAGCAAAGATGCTAGGAATAAGCCAAGTTCAGGTATCTAGAATTGAAAAGAAAGTTTTAAATGTAATGAGAGATAAATTACAGGATTAA
PROTEIN sequence
Length: 252
MEKGNFKREEYNYDDNSQLLPLAKAGDEVAMNRLIEMNLPLVSSLSKKFLNRGYDYEDIFQIGSIGLVKAIKNFDASFNVKFSTYAVPMIVGEIKRFLRDDGMIKVSRNIKSLARKIHFDKEELTKQLDREPTIEELSEYSGIEKEDLVFAVESASSLQYLYDTIHQDDGAPVLLIDKLSEKGVEDNDMIDKIALKEALRSLDEKSRQIIMLRYFKDKTQVQVAKMLGISQVQVSRIEKKVLNVMRDKLQD*