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NECEvent2014_8_3_scaffold_1504_5

Organism: NECEvent2014_8_3_Clostridium_paraputrificum_30_11

near complete RP 51 / 55 MC: 1 BSCG 50 / 51 ASCG 14 / 38 MC: 1
Location: comp(3590..4933)

Top 3 Functional Annotations

Value Algorithm Source
DNA-directed RNA polymerase subunit beta' {ECO:0000256|HAMAP-Rule:MF_01322}; Short=RNAP subunit beta' {ECO:0000256|HAMAP-Rule:MF_01322};; EC=2.7.7.6 {ECO:0000256|HAMAP-Rule:MF_01322};; RNA polymerase similarity UNIPROT
DB: UniProtKB
  • Identity: 87.6
  • Coverage: 434.0
  • Bit_score: 762
  • Evalue 3.50e-217
rpoC; DNA-directed RNA polymerase, beta' subunit (EC:2.7.7.6) similarity KEGG
DB: KEGG
  • Identity: 85.3
  • Coverage: 448.0
  • Bit_score: 757
  • Evalue 1.70e-216
DNA-directed RNA polymerase subunit beta' n=1 Tax=Clostridium celatum DSM 1785 RepID=L1QHX6_9CLOT similarity UNIREF
DB: UNIREF100
  • Identity: 87.6
  • Coverage: 434.0
  • Bit_score: 762
  • Evalue 2.50e-217

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Taxonomy

Clostridium celatum → Clostridium → Clostridiales → Clostridia → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 1344
CCATCTGGTAAGATTATAGAATTACCAATTAGAGCATCCTTTAGAGAAGGTCTAGATGTACTTGAATACTTCTTATCTACTCACGGAGCTAGAAAAGGTAATGCCGATACCGCCTTAAAGACTGCCGATTCAGGATACTTAACTAGAAGATTAGTTGATGTTTCTCAAGACGTAATTGTAAGAGAAGAAGACTGTGGCGCTACAGATGGTATGGTTGTATCTGAAATTAGAGAAGGTAATGAAGTTGTTGAAGGCTTAGCTGAAAGATTAACAGGTAGATATCTTGCAGAAGATGTAATAAACCCTTCTACAGGAGAAGTTATTGCTAATAACGATACTTATGTTGATTCAGAAATGGCAGAAACAATAGTAGCCACAGGAGTTAAAAAGGTTAAAATTAGATCTGTATTTACATGTAAGTGTAAAATAGGTGTATGTGCTAAGTGTTATGGAATGAATATGGCTACTGCTAAGAAGATAAACATAGGTGAAGCAGTTGGTATAATAGCTGCTCAATCTATCGGTGAACCAGGAACTCAGCTTACAATGAGAACATTCCATACAGGTGGTGTTGCCGGTGCGGATATAACACAAGGTCTTCCTAGAGTTGAAGAATTATTTGAAGCTAGAAAACCTAAGGGGCTTGCAATTGTAAGTGAAATTAGTGGTACTGTAAGAATAGAGGAAACTAAGAAAAAGAGAACTGTATATGTAATGGGAGCTGATGGCGAAGAAAAGAGCTATGATATTCCATTTGGATCAAGACTAAAAGTTAACGATAATGATGTTATAGAAGCTGGAGATGAAGTTACAGAAGGTTCTGTTAACCCACATGATATCATGAATATCAAGGGTATAGATGGTGCTAGAAGATATCTGCTTAGTGAAGTTCAAAAAGTTTATAGACTTCAAGGGGTTGATATTAATGATAAGCACTTAGAAGTAGTTGTTAGACAAATGACTAGAAAGATTAAAGTTACAGATTCTGGTGATACTGAACTATTACCTGGAACAATGATTGATATATTTGACTTCGAAGAAGCAAATGAAAAGGTAAGAGAGTTTGGTGGAGAAGAAGCTACAGGAGAACAAGCGCTATTAGGAATTACTAAAGCTGCTCTTGCAACTGACAGTTTCTTATCAGCAGCATCATTCCAAGAAACAACAAGAGTACTTACAGAAGCTGCAATAAAGGGTAAAACTGATCCTCTTGTTGGATTGAAGGAAAATGTAATAATAGGTAAGCTGATTCCAGCTGGAACTGGTATGATGAGATACAGATCAGTAAAGCTTGATGTTGAAGAAGATTTAACTATGGATGACAGCTTATTAAAGGTAGAATAA
PROTEIN sequence
Length: 448
PSGKIIELPIRASFREGLDVLEYFLSTHGARKGNADTALKTADSGYLTRRLVDVSQDVIVREEDCGATDGMVVSEIREGNEVVEGLAERLTGRYLAEDVINPSTGEVIANNDTYVDSEMAETIVATGVKKVKIRSVFTCKCKIGVCAKCYGMNMATAKKINIGEAVGIIAAQSIGEPGTQLTMRTFHTGGVAGADITQGLPRVEELFEARKPKGLAIVSEISGTVRIEETKKKRTVYVMGADGEEKSYDIPFGSRLKVNDNDVIEAGDEVTEGSVNPHDIMNIKGIDGARRYLLSEVQKVYRLQGVDINDKHLEVVVRQMTRKIKVTDSGDTELLPGTMIDIFDFEEANEKVREFGGEEATGEQALLGITKAALATDSFLSAASFQETTRVLTEAAIKGKTDPLVGLKENVIIGKLIPAGTGMMRYRSVKLDVEEDLTMDDSLLKVE*