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NECEvent2014_8_3_scaffold_1653_5

Organism: NECEvent2014_8_3_Clostridium_paraputrificum_30_11

near complete RP 51 / 55 MC: 1 BSCG 50 / 51 ASCG 14 / 38 MC: 1
Location: comp(3551..4447)

Top 3 Functional Annotations

Value Algorithm Source
Periplasmic binding s and sugar binding domain of LacI family protein n=4 Tax=Clostridium difficile RepID=T3SRK4_CLODI similarity UNIREF
DB: UNIREF100
  • Identity: 57.5
  • Coverage: 299.0
  • Bit_score: 352
  • Evalue 3.00e-94
  • rbh
Transcriptional regulator, LacI family {ECO:0000313|EMBL:AJH02029.1}; TaxID=1520 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium beijerinck similarity UNIPROT
DB: UniProtKB
  • Identity: 57.5
  • Coverage: 299.0
  • Bit_score: 352
  • Evalue 5.50e-94
transcriptional regulator, LacI family similarity KEGG
DB: KEGG
  • Identity: 56.5
  • Coverage: 299.0
  • Bit_score: 349
  • Evalue 9.40e-94

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Taxonomy

Clostridium beijerinckii → Clostridium → Clostridiales → Clostridia → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 897
ATACTGAAGATAGCAGAAGAATTAGGATACTTCAAAACTCAAAAAAAGAGTGAAGATAAAATAATTAGAATGATAAAATTCAAAAAACATGGATATATATTATCAGATACTCCATTCTTTTCAAAGTTAATTGAATCTTGTGAAAGAACTTGCAGAAATAGTGGGTATGAACTTTTAATTACTCAAGTTGAAGCTGGAAAAGATACTAAGGAAGATATACAAAAAATATTTACTCAAAAGAGAGTAGATGGAATATTGCTTTTAGGAACTGAGATGGAAGAAGAAGATTTTAGTGAGTTTGAAAATCTAAATATTCCAATGGTAGTTGTAGATACTTATTTTAAAGCTAAGGATTGTGATTTTGTTCTTATTAATAACGATAGAGGAGCATATTTAGCTACTAAATATATAATTGATAGAGGTATTAAGGATATTGGTTATATAGGTAGTACTGTAGATATTAGCAACTTTAAGTGTCGTAAAGAAGGATTCTTTCAGTCAATGAAAGAGCATAACCTAGAGGTTCATGAAGAGAATATGTATAAGGTAGAACCAACTACAGATGGAGCCTATAGAGATTTTAAAGAGATATTATCAAATGAAAATATAAAACTTCCAAAAGCATTGTTTGCATTTAATGATATTATTGCATTAGGTGCAATAAAAGCTATGAATGAAAAAGGAATTAAAATTCCTGAAGATGTGTCCATAGTTGGATTTGATGATATTCCATTTAGTGATATGATAAATCCTCCAATGACTACTGTAAGAGTAGATGTTGAAAGATTAGGCAAGGTTTCTATTAATAGACTAATAGAAAAGATAGAAGAAGAGGATGAAGGAAAACTAAAAGTACAAATATCTACTGATATTGTTGAAAGAAAAAGTGTTATATAA
PROTEIN sequence
Length: 299
ILKIAEELGYFKTQKKSEDKIIRMIKFKKHGYILSDTPFFSKLIESCERTCRNSGYELLITQVEAGKDTKEDIQKIFTQKRVDGILLLGTEMEEEDFSEFENLNIPMVVVDTYFKAKDCDFVLINNDRGAYLATKYIIDRGIKDIGYIGSTVDISNFKCRKEGFFQSMKEHNLEVHEENMYKVEPTTDGAYRDFKEILSNENIKLPKALFAFNDIIALGAIKAMNEKGIKIPEDVSIVGFDDIPFSDMINPPMTTVRVDVERLGKVSINRLIEKIEEEDEGKLKVQISTDIVERKSVI*