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NECEvent2014_8_3_scaffold_1710_1

Organism: NECEvent2014_8_3_Clostridium_paraputrificum_30_11

near complete RP 51 / 55 MC: 1 BSCG 50 / 51 ASCG 14 / 38 MC: 1
Location: 3..2039

Top 3 Functional Annotations

Value Algorithm Source
DNA-directed RNA polymerase subunit beta {ECO:0000256|HAMAP-Rule:MF_01321}; Short=RNAP subunit beta {ECO:0000256|HAMAP-Rule:MF_01321};; EC=2.7.7.6 {ECO:0000256|HAMAP-Rule:MF_01321};; RNA polymerase su similarity UNIPROT
DB: UniProtKB
  • Identity: 89.9
  • Coverage: 680.0
  • Bit_score: 1220
  • Evalue 0.0
rpoB; DNA-directed RNA polymerase, beta subunit (EC:2.7.7.6) similarity KEGG
DB: KEGG
  • Identity: 87.9
  • Coverage: 680.0
  • Bit_score: 1199
  • Evalue 0.0
DNA-directed RNA polymerase subunit beta n=1 Tax=Clostridium sp. 7_2_43FAA RepID=V9H1M9_9CLOT similarity UNIREF
DB: UNIREF100
  • Identity: 89.9
  • Coverage: 680.0
  • Bit_score: 1220
  • Evalue 0.0

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Taxonomy

Clostridium sp. 7_2_43FAA → Clostridium → Clostridiales → Clostridia → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 2037
GTTAATGAATATGGGTTTATAGAAACACCATATAGAATTATAGATAAAGAAACTAATACAATTACAAATGAAATAAGATATTTTACGGCAGATGAGGAAGATCAATATTTAGTTGCACAAGCTAAAGAACCGATTGACGGAAATGGTCACTTTGTTGATAAAAAGGTAACAGTAAGAAATAAGGAAGATGTATTTGTTGTACCAGCAGAAGATGTAGATTTAATAGACGTATCGCCTAGACAAATAGTATCAGTTGCTACTGCAATGATACCTTTCCTTGAGAATGACGATGCCTCAAGAGCACTGATGGGATCAAACATGCAACGTCAAGCTGTTCCATTATTAAAGACTCAAGCTCCTATCGTTGGTACAGGAATAGAGTACAAAGCAGCAGTAGACTCAGGAGTACTTCCTAAGGCTAAAAATGCTGGTGTTGTAACTTATGTAAGTGCTAACGAAGTGAGAATTAAAAGAGATATTGATGGCGGAATTGATACTTATAAATTACTTAAGTTTAAGAGAAGTAACCAAGGTATGTGCATAAATCAACGACCAATAGTTGATAAAGGTGAAATAGTATTTAAGAATCAAGTATTAGCTGATGGTCCATCAACAGATCTAGGTGAAATATCATTAGGTAAAAATATCAGAATGGGATTCATTACGTGGGAAGGATATAACTACGAAGATGCTATGCTTATTTCTGAAGAACTAGTTAGAGAAGATGTATTTACATCTATTCATATAGAAGAATATGAATGTGAAGCTAGAGACACAAAATTAGGACCAGAAGAAATTACTAGAGATATTCCTAATGTAAGTGAAGATGCACTTAAGGATATCGATGAAAGAGGAATAATAAGAGTAGGTGCTGAAGTAAGATCTGGAGATATTCTTGTTGGTAAGGTTACTCCAAAGGGTGAAACTGAATTAACAGCTGAAGAAAGACTGTTAAGAGCAATATTCGGTGAAAAGGCAAGAGAAGTAAGAGATACTTCATTAAGAGCTCCTCATGGTGAAGCTGGTATAATTGTAGATGTTAAAGTGTTTACAAGAGAAAATGGAGACGAATTAAATCCAGGCGTAAATGAACTTGTAAGAGCTTATATTGCGCAAAAGAGAAAGATATCTGTAGGGGATAAGATGGCTGGACGTCATGGTAACAAGGGGGTTATCTCAAGAGTACTTCCTGAAGAAGATATGCCATTTTTACCAGACGGAAGACCGCTACAAATATGTTTAAATCCTCTAGGGGTTCCTTCACGTATGAACATCGGTCAGGTACTTGAAGTTCACTTAGGATGGGCTGCTAGCCAATTAGGATGGCATATAGCTACTCCAGTATTTGATGGAGCAACTGAAGAAGATATAGAAGAATGTCTTGAAAAAGCAGGTTATAATGCTAATGGTAAAACTGTTTTATATGATGGTAGAACAGGAGAACCATTTGATAATGAAGTTACAGTTGGTATAATGTATATCTTAAAGCTAGCTCACTTAGTTGACGATAAGATTCATGCTAGATCAACTGGACCATACTCACTAGTTACACAACAACCACTTGGAGGTAAAGCTCAATTTGGTGGTCAAAGATTTGGTGAAATGGAAGTTTGGGCATTAGAAGCATATGGTGCTGCGCATACATTACAAGAAATATTAACTGTTAAGTCAGATGATGTTGTAGGTAGAGTTAAGACATATGAAGCAATAGTTAAGGGTGAAAATATCCCTGAACCAGGTGTTCCAGAATCATTTAAGGTTCTTATTAAAGAACTTCAAGCTCTTTGCTTAGACATTAAAGTTTTAAATGAAGAAAATCAAGAAGTTCAATTAAAAGAATTCGCAGATGAGGATATGGAAAACTTAGAGGTGAATATAGAAGGAACAGAAGAATTTACTTCTGAACCAGAAGCGGAAATTGATGATAGCTATACAGTAGAAGAAGTAGAACCAGAACAAGAAGAAGATTTCGAAAGTTTTCAAATCGAGGGACTACAAGAAGATTTAGTACTAGATGATTTTAATGACGAACACTAA
PROTEIN sequence
Length: 679
VNEYGFIETPYRIIDKETNTITNEIRYFTADEEDQYLVAQAKEPIDGNGHFVDKKVTVRNKEDVFVVPAEDVDLIDVSPRQIVSVATAMIPFLENDDASRALMGSNMQRQAVPLLKTQAPIVGTGIEYKAAVDSGVLPKAKNAGVVTYVSANEVRIKRDIDGGIDTYKLLKFKRSNQGMCINQRPIVDKGEIVFKNQVLADGPSTDLGEISLGKNIRMGFITWEGYNYEDAMLISEELVREDVFTSIHIEEYECEARDTKLGPEEITRDIPNVSEDALKDIDERGIIRVGAEVRSGDILVGKVTPKGETELTAEERLLRAIFGEKAREVRDTSLRAPHGEAGIIVDVKVFTRENGDELNPGVNELVRAYIAQKRKISVGDKMAGRHGNKGVISRVLPEEDMPFLPDGRPLQICLNPLGVPSRMNIGQVLEVHLGWAASQLGWHIATPVFDGATEEDIEECLEKAGYNANGKTVLYDGRTGEPFDNEVTVGIMYILKLAHLVDDKIHARSTGPYSLVTQQPLGGKAQFGGQRFGEMEVWALEAYGAAHTLQEILTVKSDDVVGRVKTYEAIVKGENIPEPGVPESFKVLIKELQALCLDIKVLNEENQEVQLKEFADEDMENLEVNIEGTEEFTSEPEAEIDDSYTVEEVEPEQEEDFESFQIEGLQEDLVLDDFNDEH*