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NECEvent2014_8_3_scaffold_2523_1

Organism: NECEvent2014_8_3_Clostridium_paraputrificum_30_11

near complete RP 51 / 55 MC: 1 BSCG 50 / 51 ASCG 14 / 38 MC: 1
Location: comp(1..915)

Top 3 Functional Annotations

Value Algorithm Source
rsmH; 16S rRNA methyltransferase (EC:2.1.1.199) similarity KEGG
DB: KEGG
  • Identity: 84.3
  • Coverage: 305.0
  • Bit_score: 530
  • Evalue 4.00e-148
Ribosomal RNA small subunit methyltransferase H {ECO:0000256|HAMAP-Rule:MF_01007}; EC=2.1.1.199 {ECO:0000256|HAMAP-Rule:MF_01007, ECO:0000313|EMBL:AIY82582.1};; 16S rRNA m(4)C1402 methyltransferase {E similarity UNIPROT
DB: UniProtKB
  • Identity: 84.3
  • Coverage: 305.0
  • Bit_score: 530
  • Evalue 2.00e-147
Ribosomal RNA small subunit methyltransferase H n=1 Tax=Clostridium saccharobutylicum DSM 13864 RepID=U5MVN7_CLOSA similarity UNIREF
DB: UNIREF100
  • Identity: 83.9
  • Coverage: 305.0
  • Bit_score: 529
  • Evalue 2.40e-147

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Taxonomy

Clostridium baratii → Clostridium → Clostridiales → Clostridia → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 915
ATGGAATTTAAACACGTTTCAGTTTTATTAAATGAATGTCTTGATGCCTTAAATATAAAAGATGATGGAATTTATGTAGACTGTACCCTAGGGGGAGCAGGTCATTCATCTCATATATTACAAAGGTTATCAAAGGATGGTTTATTGGTAGGAATAGACCAGGATACAGATGCTTTAAAAGCAGCTGGTGAAAGATTAAAAGAATATGAAAATAAGAAGTTAGTCCATAATAATTTTCATAATATAGATAGTATTTTAGAAGAATTAGAAATACCAAAAGTTGATGGAATATTAATGGATCTTGGGGTGTCCTCTTATCAATTAGATGAGGGAGAAAGAGGATTTAGTTATATGAAAGATGCTCCTTTAGATATGAGAATGAACAGAGATAGAGAGTTCTCTGCTTATGACGTAGTTAATAGTTACTCCATGGAGGATCTTTGGAGAATTATAAGAGATTATGGTGAGGAAAAGTTTGCAAAAAGAGTAGCGGAATTTATAGTTAATAAAAGAGAAGAAAAGCCAATAGAAACTACTCTAGAGCTTGTTGACATAATAAAGGCAGCAATACCTGCAAAAGCTAGAAGAGAAGGTCCTCATCCGGCTAAAAGAACCTTTCAAGCTATTAGAATAGAAGTTAATGGGGAGCTGGAAATTCTAAATAAAGCTATTGAAGATGGGGTGAATAGACTAAATAAAGGTGGAAGAATGGCAATTATAACCTTCCATTCCTTAGAAGATAGGATTGTAAAGTTAAAGTTTAGAGAACTTGCAAATCCATGTACTTGTCCAAAGGAGTTCCCAATCTGTGTATGCGGGAAGAAACCTTTAGTTAAGCTTATATCAAGAAAAGCTATTGAACCATCAAAAGAAGAAGTAGAAGAAAATCCAAGAAGTAGAAGTGCTAAGTTAAGA
PROTEIN sequence
Length: 305
MEFKHVSVLLNECLDALNIKDDGIYVDCTLGGAGHSSHILQRLSKDGLLVGIDQDTDALKAAGERLKEYENKKLVHNNFHNIDSILEELEIPKVDGILMDLGVSSYQLDEGERGFSYMKDAPLDMRMNRDREFSAYDVVNSYSMEDLWRIIRDYGEEKFAKRVAEFIVNKREEKPIETTLELVDIIKAAIPAKARREGPHPAKRTFQAIRIEVNGELEILNKAIEDGVNRLNKGGRMAIITFHSLEDRIVKLKFRELANPCTCPKEFPICVCGKKPLVKLISRKAIEPSKEEVEENPRSRSAKLR