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NECEvent2014_8_3_scaffold_3936_1

Organism: NECEvent2014_8_3_Clostridium_paraputrificum_30_11

near complete RP 51 / 55 MC: 1 BSCG 50 / 51 ASCG 14 / 38 MC: 1
Location: comp(3..1178)

Top 3 Functional Annotations

Value Algorithm Source
Transcription termination factor Rho {ECO:0000256|HAMAP-Rule:MF_01884}; EC=3.6.4.- {ECO:0000256|HAMAP-Rule:MF_01884};; ATP-dependent helicase Rho {ECO:0000256|HAMAP-Rule:MF_01884}; TaxID=1351755 speci similarity UNIPROT
DB: UniProtKB
  • Identity: 79.4
  • Coverage: 394.0
  • Bit_score: 615
  • Evalue 6.00e-173
Transcription termination factor Rho n=1 Tax=Clostridium chauvoei JF4335 RepID=S6ENB2_9CLOT similarity UNIREF
DB: UNIREF100
  • Identity: 79.7
  • Coverage: 394.0
  • Bit_score: 616
  • Evalue 1.90e-173
rho; transcription termination factor Rho similarity KEGG
DB: KEGG
  • Identity: 76.3
  • Coverage: 413.0
  • Bit_score: 611
  • Evalue 2.30e-172

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Taxonomy

Clostridium chauvoei → Clostridium → Clostridiales → Clostridia → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 1176
TTGACCAAAGAACAATACGAGGATATGACTTTAGTAGAGTTAAAAGAAGTGGCTAAGTCATTAGAAATTAAGAACATATCAAAGTTAAAAAAGAGTGAACTTATAGATCAAATAATAGCAACAAAAGCTCATGCAATAAAAAAGGATGGGGTAGTTTTAAGAGAGAAGATTTCTCCTAAAAATAATGTTGTTAATAGTACTAATAGGGAAGAAGTAAGAAGTAGTGAGAAAAAAGAAGAGCTGAAAGCTATGATAAATGATTCTCATATGGCTAGAGGAATACTTGAAATATTAGAAAATAATAATTTTGGATTTTTAAGATGTAAAAATTATTTAACAAGTAGTGAAGATATATATGTTTCTCCATCCCAAATAAGAAGATTTAACCTGAAAACTGGAGATGAAGTTATTGGGAAGGTTAGAGAAGCTAAAGAGGGAGAAAAGTTTAAAGCTTTATTATACGTTGAAAAGGTAAATGGAGAACATCCTGAGAAGGCTATAGGAAGAAGAGCTTTTGAAAATTTAGTTCCAATATATCCAGCAGAAAGAATTAGATTAGAGGGAAGTAATCCTTTAGATTTATCATCTAGAATGATGGATATAATATGTCCTATCGGTAAAGGACAAAGAGGAATAATCGTAGCACCTCCTAAGGCAGGTAAAACTACACTTTTAAAAAAGATTGCTCAAAGTATAACTAATAATAACCCAGAAGTTGTATTGATAGTGTTACTTATAGATGAAAGGCCAGAAGAAGTTACTGATATGCAAAGAAGTATAAATGGAGAGGTAATTTATTCTACATTTGATGAAGAACCGCAAAATCATGCAAAAGTATCACAAATAGTTTTAGAAAGAGCTAAGAGAATAGTTGAGCAAGGTAAGGATGTCGTAATCCTATTGGATTCTTTAACAAGGTTATCAAGAGCATATAACTTAACTATTACTCCAACAGGAAGAACTTTATCAGGTGGGTTAGATCCAGGAGCATTAATTATGCCTAAGAAGTTCTTCGGAGCTGCTAGAAATATAGAAGGAGGCGGTAGCTTAACAATATTAGCTACCGCACTTGTTGATACAGGTTCAAGAATGGATGATATGATATTTGAAGAATTTAAGGGTACTGGTAATATGGAAGTACACTTAGATAGAAAGCTTCAAGAGAGAAGAATATTC
PROTEIN sequence
Length: 392
LTKEQYEDMTLVELKEVAKSLEIKNISKLKKSELIDQIIATKAHAIKKDGVVLREKISPKNNVVNSTNREEVRSSEKKEELKAMINDSHMARGILEILENNNFGFLRCKNYLTSSEDIYVSPSQIRRFNLKTGDEVIGKVREAKEGEKFKALLYVEKVNGEHPEKAIGRRAFENLVPIYPAERIRLEGSNPLDLSSRMMDIICPIGKGQRGIIVAPPKAGKTTLLKKIAQSITNNNPEVVLIVLLIDERPEEVTDMQRSINGEVIYSTFDEEPQNHAKVSQIVLERAKRIVEQGKDVVILLDSLTRLSRAYNLTITPTGRTLSGGLDPGALIMPKKFFGAARNIEGGGSLTILATALVDTGSRMDDMIFEEFKGTGNMEVHLDRKLQERRIF