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NECEvent2014_8_3_Enterobacteriales_53_8_partial

NECEvent2014_8_3_Enterobacteriales_53_8
In projects: NECEvent2014_8_3

Consensus taxonomy: Enterobacteriales  →  Gammaproteobacteria  →  Proteobacteria  →  Bacteria

Description

ESOM area

Displaying items 101-150 of 1510 in total
contig # features sequence size GC content (%) Cov Coding Density (%)
NECEvent2014_8_3_scaffold_1829 178_003_scaffold_1829
Order: Enterobacteriales (100%)
5 3866 bp 53.34 10.05 84.74
NECEvent2014_8_3_scaffold_1574 178_003_scaffold_1574
Species: Klebsiella oxytoca (100%)
5 4703 bp 57.41 7.59 92.43
NECEvent2014_8_3_scaffold_1833 178_003_scaffold_1833
Genus: Kosakonia (60%)
5 3860 bp 53.19 7.03 87.20
NECEvent2014_8_3_scaffold_1328 178_003_scaffold_1328
Genus: Enterobacter (60%)
5 5744 bp 54.02 10.13 97.82
NECEvent2014_8_3_scaffold_1842 178_003_scaffold_1842
Order: Enterobacteriales (60%)
5 3844 bp 56.30 8.27 91.94
NECEvent2014_8_3_scaffold_1846 178_003_scaffold_1846
Order: Enterobacteriales (100%)
5 3837 bp 53.45 7.31 74.28
NECEvent2014_8_3_scaffold_1593 178_003_scaffold_1593
Order: Enterobacteriales (100%)
5 4628 bp 57.99 8.46 95.03
NECEvent2014_8_3_scaffold_2105 178_003_scaffold_2105
Genus: Enterobacter (80%)
5 3235 bp 55.52 6.86 91.90
NECEvent2014_8_3_scaffold_1598 178_003_scaffold_1598
Order: Enterobacteriales (100%)
5 4615 bp 54.19 8.52 88.73
NECEvent2014_8_3_scaffold_2366 178_003_scaffold_2366
Order: Enterobacteriales (100%)
5 2760 bp 49.93 8.37 78.04
NECEvent2014_8_3_scaffold_1600 178_003_scaffold_1600
Order: Enterobacteriales (100%)
5 4613 bp 53.65 9.14 92.15
NECEvent2014_8_3_scaffold_1858 178_003_scaffold_1858
Order: Enterobacteriales (100%)
5 3818 bp 55.08 9.98 88.87
NECEvent2014_8_3_scaffold_1363 178_003_scaffold_1363
Order: Enterobacteriales (100%)
5 5622 bp 51.69 8.51 84.26
NECEvent2014_8_3_scaffold_2133 178_003_scaffold_2133
Species: Escherichia coli (60%)
5 3172 bp 56.12 9.74 98.08
NECEvent2014_8_3_scaffold_2134 178_003_scaffold_2134
Species: Enterobacter aerogenes (60%)
5 3166 bp 54.11 9.24 98.26
NECEvent2014_8_3_scaffold_2654 178_003_scaffold_2654
Order: Enterobacteriales (60%)
5 2378 bp 53.91 10.16 95.25
NECEvent2014_8_3_scaffold_2924 178_003_scaffold_2924
Order: Enterobacteriales (80%)
5 2083 bp 45.56 6.77 60.06
NECEvent2014_8_3_scaffold_1908 178_003_scaffold_1908
Genus: Enterobacter (60%)
5 3687 bp 55.06 7.61 89.91
NECEvent2014_8_3_scaffold_2421 178_003_scaffold_2421
Order: Enterobacteriales (100%)
5 2669 bp 54.44 7.76 97.12
NECEvent2014_8_3_scaffold_1656 178_003_scaffold_1656
Genus: Enterobacter (60%)
5 4437 bp 55.71 9.06 81.61
NECEvent2014_8_3_scaffold_2168 178_003_scaffold_2168
Class: Gammaproteobacteria (60%)
5 3094 bp 52.20 8.87 90.76
NECEvent2014_8_3_scaffold_1662 178_003_scaffold_1662
Genus: Enterobacter (60%)
5 4404 bp 58.42 8.48 98.71
NECEvent2014_8_3_scaffold_1918 178_003_scaffold_1918
Genus: Kosakonia (60%)
5 3667 bp 51.05 9.82 78.54
NECEvent2014_8_3_scaffold_2687 178_003_scaffold_2687 5 2346 bp 46.59 8.12 62.40
NECEvent2014_8_3_scaffold_2695 178_003_scaffold_2695
Species: Escherichia coli (100%)
4 2337 bp 34.75 9.76 97.43
NECEvent2014_8_3_scaffold_2696 178_003_scaffold_2696
Species: Enterobacter sp. YD4 (50%)
4 2337 bp 54.43 9.76 99.10
NECEvent2014_8_3_scaffold_1930 178_003_scaffold_1930
Genus: Enterobacter (100%)
4 3634 bp 54.02 7.93 88.25
NECEvent2014_8_3_scaffold_2444 178_003_scaffold_2444
Species: Kosakonia radicincitans (50%)
4 2635 bp 54.95 5.69 85.96
NECEvent2014_8_3_scaffold_1934 178_003_scaffold_1934
Species: Shimwellia blattae (75%)
4 3630 bp 55.79 6.32 96.53
NECEvent2014_8_3_scaffold_1937 178_003_scaffold_1937
Species: Trabulsiella guamensis (50%)
4 4637 bp 52.45 8.05 94.52
NECEvent2014_8_3_scaffold_2195 178_003_scaffold_2195
Species: Enterobacter cloacae (50%)
4 3035 bp 50.51 6.82 91.24
NECEvent2014_8_3_scaffold_2710 178_003_scaffold_2710
Genus: Enterobacter (75%)
4 2317 bp 54.64 8.48 87.27
NECEvent2014_8_3_scaffold_2199 178_003_scaffold_2199
Order: Enterobacteriales (100%)
4 3029 bp 54.11 8.52 86.96
NECEvent2014_8_3_scaffold_2455 178_003_scaffold_2455
Species: Enterobacter cloacae (50%)
4 2620 bp 54.69 6.64 93.78
NECEvent2014_8_3_scaffold_2967 178_003_scaffold_2967
Genus: Enterobacter (50%)
4 2048 bp 56.93 7.91 91.55
NECEvent2014_8_3_scaffold_2457 178_003_scaffold_2457
Order: Enterobacteriales (75%)
4 2619 bp 52.35 4.81 87.40
NECEvent2014_8_3_scaffold_2205 178_003_scaffold_2205
Genus: Kosakonia (50%)
4 3021 bp 47.53 7.85 81.43
NECEvent2014_8_3_scaffold_2206 178_003_scaffold_2206
Genus: Enterobacter (50%)
4 3015 bp 54.00 8.91 91.84
NECEvent2014_8_3_scaffold_2462 178_003_scaffold_2462
Order: Enterobacteriales (100%)
4 2604 bp 55.53 9.50 84.79
NECEvent2014_8_3_scaffold_1952 178_003_scaffold_1952
Species: Escherichia albertii (75%)
4 3578 bp 50.56 9.14 82.42
NECEvent2014_8_3_scaffold_2208 178_003_scaffold_2208
Order: Enterobacteriales (100%)
4 3012 bp 53.62 6.08 80.68
NECEvent2014_8_3_scaffold_2976 178_003_scaffold_2976
Order: Enterobacteriales (75%)
4 2042 bp 53.77 6.46 89.32
NECEvent2014_8_3_scaffold_2465 178_003_scaffold_2465
Genus: Enterobacter (75%)
4 2600 bp 53.77 7.15 94.38
NECEvent2014_8_3_scaffold_2979 178_003_scaffold_2979
Order: Enterobacteriales (75%)
4 2041 bp 50.02 8.67 83.64
NECEvent2014_8_3_scaffold_2728 178_003_scaffold_2728
Genus: Enterobacter (50%)
4 2304 bp 53.65 10.03 85.81
NECEvent2014_8_3_scaffold_3752 178_003_scaffold_3752
Species: Citrobacter koseri (75%)
4 1497 bp 47.76 8.22 94.99
NECEvent2014_8_3_scaffold_1449 178_003_scaffold_1449
Species: Enterobacter sp. YD4 (75%)
4 5188 bp 56.86 8.12 98.88
NECEvent2014_8_3_scaffold_1961 178_003_scaffold_1961
Order: Enterobacteriales (75%)
4 3564 bp 53.62 8.75 95.79
NECEvent2014_8_3_scaffold_2996 178_003_scaffold_2996
Genus: Enterobacter (50%)
4 2024 bp 52.96 8.30 100.64
NECEvent2014_8_3_scaffold_3771 178_003_scaffold_3771
Order: Enterobacteriales (100%)
4 1487 bp 54.14 6.46 92.60
Displaying items 101-150 of 1510 in total

Ribosomal proteins shown here were identified using keyword searches of all annotations.

The SCGs are found by conducting USEARCH with a custom database.

The SCGs are found by conducting USEARCH with a custom database.