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NECEvent2014_8_3_Enterobacteriales_53_8_partial

NECEvent2014_8_3_Enterobacteriales_53_8
In projects: NECEvent2014_8_3

Consensus taxonomy: Enterobacteriales  →  Gammaproteobacteria  →  Proteobacteria  →  Bacteria

Metagenomic Context

Parent: NECEvent2014_8_3_UNK

Properties

Avg. coverage: 7.93 Longest contig: 10.66 Kbp Bin length: 3.03 Mbp GC content: 53.33 %
Contigs count: 1510 Features count: 4036 rRNAs count: 0 tRNAs count: 20

Genome completeness

partial RP 3 / 55 MC: 1 BSCG 3 / 51 ASCG 6 / 38 MC: 1

Description

ESOM area

Displaying items 1-50 of 1510 in total
contig # features sequence size GC content (%) Cov Coding Density (%)
NECEvent2014_8_3_scaffold_4930 178_003_scaffold_4930
Species: Kosakonia sacchari (100%)
1 1000 bp 49.90 7.35 82.20
NECEvent2014_8_3_scaffold_4931 178_003_scaffold_4931
Species: Enterobacter sp. YD4 (50%)
2 1000 bp 56.80 8.40 83.70
NECEvent2014_8_3_scaffold_4927 178_003_scaffold_4927
Species: Kosakonia sacchari (50%)
2 1001 bp 54.65 6.89 98.60
NECEvent2014_8_3_scaffold_4928 178_003_scaffold_4928
Species: Kosakonia radicincitans (50%)
2 1001 bp 56.34 5.69 95.30
NECEvent2014_8_3_scaffold_4924 178_003_scaffold_4924
Genus: Citrobacter (66.67%)
3 1003 bp 55.93 5.68 99.90
NECEvent2014_8_3_scaffold_4920 178_003_scaffold_4920
Species: Kosakonia radicincitans (100%)
2 1004 bp 42.03 4.48 35.26
NECEvent2014_8_3_scaffold_4921 178_003_scaffold_4921
Species: Kosakonia radicincitans (50%)
2 1004 bp 49.10 7.62 66.04
NECEvent2014_8_3_scaffold_4922 178_003_scaffold_4922
Species: Salmonella enterica (50%)
2 1004 bp 54.68 5.98 98.01
NECEvent2014_8_3_scaffold_4923 178_003_scaffold_4923
Species: Escherichia coli (50%)
2 1004 bp 52.39 8.81 89.04
NECEvent2014_8_3_scaffold_4917 178_003_scaffold_4917
Species: Citrobacter freundii (50%)
2 1005 bp 52.34 10.30 89.25
NECEvent2014_8_3_scaffold_4918 178_003_scaffold_4918
Species: Escherichia coli (50%)
2 1005 bp 54.63 6.87 92.84
NECEvent2014_8_3_scaffold_4913 178_003_scaffold_4913
Species: Enterobacter sp. YD4 (100%)
1 1006 bp 53.38 3.88 99.90
NECEvent2014_8_3_scaffold_4914 178_003_scaffold_4914
Species: Enterobacter sp. 638 (50%)
2 1006 bp 47.71 7.01 70.38
NECEvent2014_8_3_scaffold_4909 178_003_scaffold_4909
Species: Enterobacter cloacae (50%)
2 1007 bp 54.52 6.26 97.42
NECEvent2014_8_3_scaffold_4910 178_003_scaffold_4910
Species: Enterobacter cloacae (100%)
1 1007 bp 59.09 7.60 67.63
NECEvent2014_8_3_scaffold_4912 178_003_scaffold_4912
Species: Kosakonia radicincitans (50%)
2 1007 bp 54.22 6.55 90.57
NECEvent2014_8_3_scaffold_4905 178_003_scaffold_4905
Order: Enterobacteriales (100%)
3 1008 bp 54.86 6.85 90.77
NECEvent2014_8_3_scaffold_4906 178_003_scaffold_4906
Species: Escherichia vulneris (50%)
2 1008 bp 55.36 7.89 99.70
NECEvent2014_8_3_scaffold_4907 178_003_scaffold_4907
Species: Citrobacter werkmanii (100%)
1 1008 bp 54.56 12.05 100.00
NECEvent2014_8_3_scaffold_4902 178_003_scaffold_4902
Species: Escherichia fergusonii (50%)
2 1011 bp 56.78 4.90 95.25
NECEvent2014_8_3_scaffold_4898 178_003_scaffold_4898
Species: Kosakonia radicincitans (50%)
2 1012 bp 54.74 4.74 85.08
NECEvent2014_8_3_scaffold_4892 178_003_scaffold_4892
Species: Enterobacteriaceae bacterium strain FGI 57 (100%)
1 1013 bp 56.37 6.81 90.92
NECEvent2014_8_3_scaffold_4896 178_003_scaffold_4896
Species: Escherichia coli (100%)
1 1013 bp 48.37 8.59 59.23
NECEvent2014_8_3_scaffold_4890 178_003_scaffold_4890
Species: Citrobacter youngae (50%)
2 1014 bp 57.00 5.33 97.93
NECEvent2014_8_3_scaffold_4891 178_003_scaffold_4891
Species: Leclercia adecarboxylata (100%)
2 1014 bp 55.52 5.92 100.30
NECEvent2014_8_3_scaffold_4887 178_003_scaffold_4887
Species: Citrobacter koseri (50%)
2 1015 bp 52.22 6.80 96.35
NECEvent2014_8_3_scaffold_4888 178_003_scaffold_4888
Species: Enterobacter sp. R4-368 (50%)
2 1015 bp 58.33 5.62 99.01
NECEvent2014_8_3_scaffold_4882 178_003_scaffold_4882
Species: Kosakonia sacchari (50%)
2 1017 bp 57.52 4.72 93.22
NECEvent2014_8_3_scaffold_4885 178_003_scaffold_4885
Species: Enterobacter cloacae (100%)
1 1017 bp 52.61 6.49 92.92
NECEvent2014_8_3_scaffold_4879 178_003_scaffold_4879
Species: Enterobacter cloacae (100%)
1 1019 bp 44.95 6.18 99.80
NECEvent2014_8_3_scaffold_4875 178_003_scaffold_4875
Species: Enterobacter cloacae (50%)
2 1020 bp 46.86 8.82 59.12
NECEvent2014_8_3_scaffold_4874 178_003_scaffold_4874
Species: Enterobacter sp. 638 (50%)
2 1021 bp 47.89 7.49 100.20
NECEvent2014_8_3_scaffold_4871 178_003_scaffold_4871
Species: Siccibacter turicensis (100%)
1 1022 bp 50.20 9.69 84.83
NECEvent2014_8_3_scaffold_4872 178_003_scaffold_4872
Species: Kosakonia radicincitans (50%)
2 1022 bp 54.70 4.40 95.99
NECEvent2014_8_3_scaffold_4870 178_003_scaffold_4870
Species: Enterobacter asburiae (50%)
2 1023 bp 57.38 4.99 100.00
NECEvent2014_8_3_scaffold_4867 178_003_scaffold_4867
Species: Enterobacter cloacae (50%)
2 1024 bp 53.03 5.86 100.20
NECEvent2014_8_3_scaffold_4863 178_003_scaffold_4863
Species: Klebsiella michiganensis (50%)
2 1025 bp 40.98 6.73 73.76
NECEvent2014_8_3_scaffold_4865 178_003_scaffold_4865
Species: Enterobacter sp. BIDMC 29 (50%)
2 1025 bp 51.61 6.73 98.05
NECEvent2014_8_3_scaffold_4866 178_003_scaffold_4866
Species: Kosakonia radicincitans (50%)
2 1025 bp 53.76 8.78 92.78
NECEvent2014_8_3_scaffold_4862 178_003_scaffold_4862
Species: Kosakonia radicincitans (100%)
1 1026 bp 55.75 8.63 100.00
NECEvent2014_8_3_scaffold_4861 178_003_scaffold_4861
Species: Leclercia adecarboxylata (100%)
2 1027 bp 60.86 7.30 98.73
NECEvent2014_8_3_scaffold_4855 178_003_scaffold_4855
Species: Klebsiella pneumoniae (100%)
1 1029 bp 50.63 9.48 99.71
NECEvent2014_8_3_scaffold_4857 178_003_scaffold_4857
Species: Kosakonia radicincitans (50%)
2 1029 bp 56.95 15.74 74.34
NECEvent2014_8_3_scaffold_4858 178_003_scaffold_4858
Species: Enterobacter sp. 35699 (50%)
2 1029 bp 54.13 6.27 100.58
NECEvent2014_8_3_scaffold_4847 178_003_scaffold_4847
Species: Citrobacter koseri (50%)
2 1030 bp 59.13 8.01 97.86
NECEvent2014_8_3_scaffold_4849 178_003_scaffold_4849
Species: Enterobacter sp. R4-368 (100%)
1 1030 bp 58.54 5.83 99.90
NECEvent2014_8_3_scaffold_4851 178_003_scaffold_4851
Species: Enterobacter sp. R4-368 (100%)
2 1030 bp 54.95 6.70 100.19
NECEvent2014_8_3_scaffold_4852 178_003_scaffold_4852
Species: Enterobacter sp. R4-368 (100%)
1 1030 bp 50.49 8.45 59.42
NECEvent2014_8_3_scaffold_4853 178_003_scaffold_4853
Species: Trabulsiella guamensis (50%)
2 1030 bp 43.30 12.23 78.93
NECEvent2014_8_3_scaffold_4841 178_003_scaffold_4841
Species: Kosakonia radicincitans (50%)
2 1031 bp 56.06 5.53 96.61
Displaying items 1-50 of 1510 in total

Ribosomal proteins shown here were identified using keyword searches of all annotations.

The SCGs are found by conducting USEARCH with a custom database.

The SCGs are found by conducting USEARCH with a custom database.