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NECEvent2014_8_3_Enterbacter-rel_53_28_hint

NECEvent2014_8_3_Enterobacteriales_53_24
In projects: NECEvent2014_8_3

Consensus taxonomy: Enterobacteriales  →  Gammaproteobacteria  →  Proteobacteria  →  Bacteria

Description

TS ESOM area

Displaying items 1-50 of 89 in total
contig # features sequence size GC content (%) Cov Coding Density (%) notes
NECEvent2014_8_3_scaffold_1111
178_003_scaffold_1111
Order: Enterobacteriales (100%)
14 7174 bp 53.21 11.73 86.60
NECEvent2014_8_3_scaffold_937
178_003_scaffold_937
Order: Enterobacteriales (100%)
13 8498 bp 51.20 12.55 87.80
NECEvent2014_8_3_scaffold_935
178_003_scaffold_935
Genus: Enterobacter (60%)
10 8542 bp 51.69 11.66 82.15
NECEvent2014_8_3_scaffold_1159
178_003_scaffold_1159
Order: Enterobacteriales (100%)
9 6821 bp 53.57 12.12 94.03
NECEvent2014_8_3_scaffold_1037
178_003_scaffold_1037
Order: Enterobacteriales (100%)
9 7666 bp 48.83 11.39 77.99
NECEvent2014_8_3_scaffold_1791
178_003_scaffold_1791
Order: Enterobacteriales (100%)
7 3975 bp 51.32 25.81 92.45
NECEvent2014_8_3_scaffold_1038
178_003_scaffold_1038
Genus: Kosakonia (71.43%)
7 7654 bp 52.95 13.91 94.34
NECEvent2014_8_3_scaffold_1264
178_003_scaffold_1264
Species: Enterobacter sp. R4-368 (50%)
6 6107 bp 53.20 19.67 92.84
NECEvent2014_8_3_scaffold_1647
178_003_scaffold_1647
Genus: Enterobacter (66.67%)
6 4464 bp 53.74 60.01 91.20
NECEvent2014_8_3_scaffold_1914
178_003_scaffold_1914
Order: Enterobacteriales (100%)
6 3677 bp 52.30 33.17 84.77
NECEvent2014_8_3_scaffold_1412
178_003_scaffold_1412
Order: Enterobacteriales (100%)
6 5390 bp 50.35 32.89 78.26
NECEvent2014_8_3_scaffold_1806
178_003_scaffold_1806
Order: Enterobacteriales (100%)
5 3936 bp 54.34 10.56 82.85
NECEvent2014_8_3_scaffold_1941
178_003_scaffold_1941
Genus: Enterobacter (50%)
4 3604 bp 55.77 13.94 100.22
NECEvent2014_8_3_scaffold_2712
178_003_scaffold_2712
Genus: Kosakonia (50%)
4 2316 bp 56.61 27.66 95.60
NECEvent2014_8_3_scaffold_3500
178_003_scaffold_3500
Order: Enterobacteriales (75%)
4 1642 bp 54.75 17.08 99.57
NECEvent2014_8_3_scaffold_1461
178_003_scaffold_1461
Genus: Enterobacter (75%)
4 5160 bp 52.11 15.15 80.58
NECEvent2014_8_3_scaffold_2748
178_003_scaffold_2748
Order: Enterobacteriales (100%)
4 2280 bp 53.42 14.14 94.21
NECEvent2014_8_3_scaffold_2282
178_003_scaffold_2282
Order: Enterobacteriales (100%)
4 2894 bp 54.77 43.28 88.32
NECEvent2014_8_3_scaffold_2798
178_003_scaffold_2798
Genus: Kosakonia (50%)
4 2220 bp 53.02 10.20 98.92
NECEvent2014_8_3_scaffold_3568
178_003_scaffold_3568
Order: Enterobacteriales (50%)
4 1601 bp 49.53 10.12 62.46
NECEvent2014_8_3_scaffold_2044
178_003_scaffold_2044
Order: Enterobacteriales (100%)
4 3349 bp 51.63 16.84 92.36
NECEvent2014_8_3_scaffold_1810
178_003_scaffold_1810
Species: Enterobacter sp. YD4 (50%)
4 3913 bp 55.92 21.81 99.28
NECEvent2014_8_3_scaffold_1827
178_003_scaffold_1827
Genus: Enterobacter (50%)
4 3872 bp 53.00 16.81 80.11
NECEvent2014_8_3_scaffold_3625
178_003_scaffold_3625
Species: Enterobacter sp. YD4 (50%)
4 1560 bp 50.77 25.10 88.27
NECEvent2014_8_3_scaffold_2353
178_003_scaffold_2353
Species: Kosakonia sacchari (50%)
4 2779 bp 52.64 50.85 83.66
NECEvent2014_8_3_scaffold_2373
178_003_scaffold_2373
Genus: Citrobacter (50%)
4 2747 bp 54.86 22.39 89.66
NECEvent2014_8_3_scaffold_2123
178_003_scaffold_2123
Species: Enterobacter sp. R4-368 (50%)
4 3194 bp 50.72 13.85 89.14
NECEvent2014_8_3_scaffold_4184
178_003_scaffold_4184
Species: Kosakonia sacchari (50%)
4 1289 bp 48.64 35.84 71.92
NECEvent2014_8_3_scaffold_2399
178_003_scaffold_2399
Genus: Enterobacter (50%)
4 2704 bp 50.85 56.86 74.89
NECEvent2014_8_3_scaffold_3180
178_003_scaffold_3180
Order: Enterobacteriales (100%)
4 1868 bp 54.93 25.29 87.69
NECEvent2014_8_3_scaffold_2170
178_003_scaffold_2170
Genus: Enterobacter (50%)
4 3091 bp 51.76 49.89 80.85
NECEvent2014_8_3_scaffold_2703
178_003_scaffold_2703
Genus: Enterobacter (66.67%)
3 2330 bp 56.65 44.29 91.16
NECEvent2014_8_3_scaffold_2484
178_003_scaffold_2484
Genus: Enterobacter (66.67%)
3 2574 bp 51.63 24.30 79.49
NECEvent2014_8_3_scaffold_1983
178_003_scaffold_1983
Species: Kosakonia sacchari (66.67%)
3 3521 bp 51.66 47.50 98.49
NECEvent2014_8_3_scaffold_2516
178_003_scaffold_2516
Order: Enterobacteriales (100%)
3 2544 bp 52.08 27.48 80.54
NECEvent2014_8_3_scaffold_3033
178_003_scaffold_3033
Order: Enterobacteriales (100%)
3 1990 bp 50.55 62.04 72.66
NECEvent2014_8_3_scaffold_1759
178_003_scaffold_1759
Species: Kosakonia sacchari (66.67%)
3 4094 bp 50.90 14.99 95.04
NECEvent2014_8_3_scaffold_3045
178_003_scaffold_3045
Genus: Enterobacter (66.67%)
3 1977 bp 52.30 37.56 82.09
NECEvent2014_8_3_scaffold_1792
178_003_scaffold_1792
Order: Enterobacteriales (100%)
3 3972 bp 53.75 15.03 84.74
NECEvent2014_8_3_scaffold_3085
178_003_scaffold_3085
Species: Enterobacter sp. R4-368 (66.67%)
3 1947 bp 54.24 17.33 97.07
NECEvent2014_8_3_scaffold_3089
178_003_scaffold_3089
Species: Kosakonia radicincitans (66.67%)
3 1944 bp 53.34 16.36 83.49
NECEvent2014_8_3_scaffold_4117
178_003_scaffold_4117
Order: Enterobacteriales (66.67%)
3 1319 bp 52.31 78.24 92.12
NECEvent2014_8_3_scaffold_3367
178_003_scaffold_3367
Order: Enterobacteriales (100%)
3 1733 bp 49.74 12.12 76.17
NECEvent2014_8_3_scaffold_3376
178_003_scaffold_3376
Order: Enterobacteriales (66.67%)
3 1724 bp 49.59 6.09 80.39
NECEvent2014_8_3_scaffold_3386
178_003_scaffold_3386
Order: Enterobacteriales (100%)
3 1718 bp 54.31 15.45 87.66
NECEvent2014_8_3_scaffold_4164
178_003_scaffold_4164
Order: Enterobacteriales (100%)
3 1300 bp 56.00 29.31 95.54
NECEvent2014_8_3_scaffold_3405
178_003_scaffold_3405
Order: Enterobacteriales (100%)
3 1704 bp 53.64 16.73 98.24
NECEvent2014_8_3_scaffold_2645
178_003_scaffold_2645
Order: Enterobacteriales (100%)
3 2384 bp 53.40 25.61 93.88
NECEvent2014_8_3_scaffold_3677
178_003_scaffold_3677
Order: Enterobacteriales (100%)
3 1534 bp 52.80 65.91 79.99
NECEvent2014_8_3_scaffold_2662
178_003_scaffold_2662
Order: Enterobacteriales (100%)
3 2372 bp 52.70 18.72 94.60
Displaying items 1-50 of 89 in total

Ribosomal proteins shown here were identified using keyword searches of all annotations.

The SCGs are found by conducting USEARCH with a custom database.

The SCGs are found by conducting USEARCH with a custom database.