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NECEvent2014_8_4_scaffold_1177

Alias: 178_004_scaffold_1177

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Displaying 6 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
NECEvent2014_8_4_scaffold_1177_1
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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2..1735
DNA (1734bp) protein (578aa)
DNA-directed RNA polymerase subunit beta' {ECO:0000256|HAMAP-Rule:MF_01322}; Short=RNAP subunit beta' {ECO:0000256|HAMAP-Rule:MF_01322};; EC=2.7.7.6 {ECO:0000256|HAMAP-Rule:MF_01322};; RNA polymerase
rpoC; DNA-directed RNA polymerase subunit beta' (EC:2.7.7.6)
DNA-directed RNA polymerase subunit beta' n=10 Tax=Clostridium perfringens RepID=RPOC_CLOP1
NECEvent2014_8_4_scaffold_1177_2
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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1848..2087
DNA (240bp) protein (80aa)
Ribosomal protein L7AE family n=11 Tax=Clostridium perfringens RepID=Q8XHR8_CLOPE
ribosomal protein L7AE family protein
Ribosomal protein L7AE family protein {ECO:0000313|EMBL:EIA15975.1}; TaxID=883064 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringe
NECEvent2014_8_4_scaffold_1177_3
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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2145..2525
DNA (381bp) protein (127aa)
30S ribosomal protein S12 n=10 Tax=Clostridium perfringens RepID=RS12_CLOP1
rpsL; 30S ribosomal protein S12
30S ribosomal protein S12 {ECO:0000255|HAMAP-Rule:MF_00403}; TaxID=195102 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens (stra
NECEvent2014_8_4_scaffold_1177_4
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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2685..3155
DNA (471bp) protein (157aa)
30S ribosomal protein S7 n=10 Tax=Clostridium perfringens RepID=RS7_CLOP1 rbh
rpsG; 30S ribosomal protein S7
30S ribosomal protein S7 {ECO:0000255|HAMAP-Rule:MF_00480}; TaxID=195103 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens (strai
NECEvent2014_8_4_scaffold_1177_5
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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3236..5302
DNA (2067bp) protein (689aa)
Elongation factor G n=8 Tax=Clostridium perfringens RepID=EFG_CLOPE rbh
Elongation factor G {ECO:0000256|HAMAP-Rule:MF_00054}; Short=EF-G {ECO:0000256|HAMAP-Rule:MF_00054};; TaxID=883064 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium
fusA; elongation factor G
NECEvent2014_8_4_scaffold_1177_6
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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5375..5455
DNA (81bp) protein (27aa)
tuf; elongation factor Tu (EC:3.6.5.3)
DNA gyrase, B subunit {ECO:0000313|EMBL:EDT70008.1}; EC=5.99.1.3 {ECO:0000313|EMBL:EDT70008.1};; Flags: Fragment;; TaxID=488537 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae
Elongation factor Tu n=14 Tax=Clostridium perfringens RepID=EFTU_CLOP1
Displaying 6 items

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