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NECEvent2014_8_4_scaffold_662_5

Organism: NECEvent2014_8_4_Clostridium_perfringens_30_8

near complete RP 49 / 55 MC: 1 BSCG 49 / 51 MC: 1 ASCG 15 / 38 MC: 1
Location: 1827..2516

Top 3 Functional Annotations

Value Algorithm Source
50S ribosomal protein L1 n=6 Tax=Clostridium perfringens RepID=RL1_CLOP1 similarity UNIREF
DB: UNIREF100
  • Identity: 100.0
  • Coverage: 229.0
  • Bit_score: 451
  • Evalue 6.30e-124
  • rbh
rplA; 50S ribosomal protein L1 similarity KEGG
DB: KEGG
  • Identity: 100.0
  • Coverage: 229.0
  • Bit_score: 451
  • Evalue 1.80e-124
50S ribosomal protein L1 {ECO:0000255|HAMAP-Rule:MF_01318}; TaxID=289380 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens (strai similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 229.0
  • Bit_score: 451
  • Evalue 8.80e-124

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Taxonomy

Clostridium perfringens → Clostridium → Clostridiales → Clostridia → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 690
ATGGGAAAGAAATATATTGAAAGTTCAAAATTAATAGATAAAAATGCATTATATACTCCAGCAGAAGCTTTAGAGCTTGCTGTTAAAACTGCAAAAGCTAAATTCGATGAAACTATCGAATTACACGTAAGATTAGGTGTAGACCCAAGACATGCTGACCAACAAGTTAGAGGAGCTGTTGTTCTTCCACACGGAACTGGTAAAGATGTTAAAGTTTTAGTTTTCGCTAAAGGTGAGAAAGCTAAAGAAGCTGAAGCTGCAGGAGCAGATTTCGTTGGAGCTGACGAATTAGTACAAAAAATTCAAGGTGAAAACTGGTTTGATTATGATGTAGTTGTTGCTACTCCAGATATGATGGGTGTAGTTGGTAGATTAGGTAGAGTATTAGGACCAAAAGGTTTAATGCCAAACCCAAAATCAGGAACAGTTACATTTGACGTAGCTAACGCTATAAAAGAAATCAAAGCAGGTAAAGTTGAATATAGAGTAGATAAGACTGCTATAGTTCACTGCCCAATAGGAAAGAAATCTTTCGGAACTGAGAAATTAGTTGAAAACTTCAAAGCTTTAATGGACGCTTTAGTAAAAGCTAAACCAGCTGCTGCTAAAGGACAATACTTAAAATCAGTTTCAGTTTCAGCTACTATGGGACCTGGAGCTAAAGTTAACCCAGCTAAAGTTTTAGATTAA
PROTEIN sequence
Length: 230
MGKKYIESSKLIDKNALYTPAEALELAVKTAKAKFDETIELHVRLGVDPRHADQQVRGAVVLPHGTGKDVKVLVFAKGEKAKEAEAAGADFVGADELVQKIQGENWFDYDVVVATPDMMGVVGRLGRVLGPKGLMPNPKSGTVTFDVANAIKEIKAGKVEYRVDKTAIVHCPIGKKSFGTEKLVENFKALMDALVKAKPAAAKGQYLKSVSVSATMGPGAKVNPAKVLD*