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NECEvent2014_8_4_scaffold_1469_2

Organism: NECEvent2014_8_4_Clostridium_perfringens_30_8

near complete RP 49 / 55 MC: 1 BSCG 49 / 51 MC: 1 ASCG 15 / 38 MC: 1
Location: 2336..3673

Top 3 Functional Annotations

Value Algorithm Source
Ribosomal protein S12 methylthiotransferase RimO n=9 Tax=Clostridium perfringens RepID=RIMO_CLOP1 similarity UNIREF
DB: UNIREF100
  • Identity: 100.0
  • Coverage: 445.0
  • Bit_score: 890
  • Evalue 7.80e-256
  • rbh
tRNA modifying protein similarity KEGG
DB: KEGG
  • Identity: 99.8
  • Coverage: 445.0
  • Bit_score: 889
  • Evalue 4.90e-256
Ribosomal protein S12 methylthiotransferase RimO {ECO:0000256|HAMAP-Rule:MF_01865, ECO:0000256|SAAS:SAAS00083292}; Short=S12 MTTase {ECO:0000256|HAMAP-Rule:MF_01865};; Short=S12 methylthiotransferase similarity UNIPROT
DB: UniProtKB
  • Identity: 99.8
  • Coverage: 445.0
  • Bit_score: 889
  • Evalue 2.40e-255

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Taxonomy

Clostridium perfringens → Clostridium → Clostridiales → Clostridia → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 1338
TTGGCGAAATATAAGGTAGGAATGGTGAGTTTAGGTTGTGATAAAAATAGAGTTGACTCAGAAATCATGCTTGGAATGGTTCAGAATGAGTACGAACTTACTAATAATCCAAAGGAAGCTGACATAATAATAGTAAATACTTGCGGATTTATAGAAAAGGCTAAACAAGAATCCATAAACACAATATTAGATATGGCAAAATATAAAACAAGTCACAACTGTAAGTTACTTATAGCTACAGGCTGCTTAACTCAAAGATATGGTGATGAATTATTAGAATTAATGCCTGAAATAGACATAATGTTAGGTGTTAATGATTATGCTAAAATAAATGAAGCCATAATGAACTTTATAAATGGAAATAATGAAAAAGTAAAAGCTACAAATTACAGTGATGTATCAATTAATGAAGGATTAAGACTTATAACAACTGATAAAGCTACTGCATACTTAAGAATTGCAGAAGGATGTGATAATTTCTGTACTTATTGCATTATTCCTAAAATAAGAGGTAAGTTTAGAAGTAGAGCTTTAGAAAGTATTGTAGAAGAAGCGAAAAAATTAGCTGAAAATGGAGTGAAAGAGTTAATATTAATAGCTCAAGACACTACTAATTATGGCATAGATATATATGGTGAAAAGAAACTTCACTTAGTTTTAAGAGAATTAGCTAAGATCGAAGGAATAGAGTGGATAAGAGTTCTTTATTGTTATCCAGAGGCTATATATGATGAACTTATAAAAGAGATCTCAGTAAATGATAAGGTATGTAATTATCTTGACTTACCTATACAACATATTAGTAATAATGTTTTAAAAAGAATGGGTAGAAAAACAACAAAAGAAGAGATAATAGGAAAAATTAATGATTTAAGAAAAAATGTTCCTAACATAGTTTTAAGAACTTCTTTAATAGTTGGTTTCCCAGGAGAATCTTGTGAAGATTTCAATGAACTAAAAGATTTTATAAAGACAATAAAATTAGATAAAGTTGGAGTCTTTACTTACTCAAGAGAAGAAGGAACACCTGCTGCTATAATGGAAGATCAAATAGATGAAGAAGTTAAAAAAGCTAGGGAAGAAGAAATAATGTTACTTCAAAAAGAAGTATCAGAAGAAATTAATAAAAACAAAGTAGGTAGAGAATATGATGTTCTTATCGAAAAGTTTAATGGAGAATATTATATAGGAAGAAGCTATGAGATGGCTCCAGATATAGATGGATGTATTTATGTGAAAGGAAATGGAGCTAAAAAGGACCAGTTCTGTAAAGTTAAAATTGAAAAGGCCTTAGAATATGATTTGGTAGGAGTTGTATGCAATGAATCTTGCAAATAA
PROTEIN sequence
Length: 446
LAKYKVGMVSLGCDKNRVDSEIMLGMVQNEYELTNNPKEADIIIVNTCGFIEKAKQESINTILDMAKYKTSHNCKLLIATGCLTQRYGDELLELMPEIDIMLGVNDYAKINEAIMNFINGNNEKVKATNYSDVSINEGLRLITTDKATAYLRIAEGCDNFCTYCIIPKIRGKFRSRALESIVEEAKKLAENGVKELILIAQDTTNYGIDIYGEKKLHLVLRELAKIEGIEWIRVLYCYPEAIYDELIKEISVNDKVCNYLDLPIQHISNNVLKRMGRKTTKEEIIGKINDLRKNVPNIVLRTSLIVGFPGESCEDFNELKDFIKTIKLDKVGVFTYSREEGTPAAIMEDQIDEEVKKAREEEIMLLQKEVSEEINKNKVGREYDVLIEKFNGEYYIGRSYEMAPDIDGCIYVKGNGAKKDQFCKVKIEKALEYDLVGVVCNESCK*