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NECEvent2014_8_4_scaffold_1536_1

Organism: NECEvent2014_8_4_Clostridium_perfringens_30_8

near complete RP 49 / 55 MC: 1 BSCG 49 / 51 MC: 1 ASCG 15 / 38 MC: 1
Location: 2..1609

Top 3 Functional Annotations

Value Algorithm Source
LysM domain protein n=4 Tax=Clostridium perfringens RepID=Q0TN97_CLOP1 similarity UNIREF
DB: UNIREF100
  • Identity: 99.8
  • Coverage: 520.0
  • Bit_score: 1026
  • Evalue 0.0
  • rbh
LysM domain protein {ECO:0000313|EMBL:EDT27045.1}; TaxID=451756 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens CPE str. F4969. similarity UNIPROT
DB: UniProtKB
  • Identity: 99.8
  • Coverage: 520.0
  • Bit_score: 1026
  • Evalue 0.0
lysM domain-containing protein similarity KEGG
DB: KEGG
  • Identity: 99.8
  • Coverage: 520.0
  • Bit_score: 1026
  • Evalue 0.0

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Taxonomy

Clostridium perfringens → Clostridium → Clostridiales → Clostridia → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 1608
TCATACATATATATTATAGTATTAGATTATTTAGGAGGGATACATTTGGTTAATTTAGATATTATTAAAGAAAGTCTTGGGTTTGAGAAGGTCTTAAGTGAAAACTCTTTAGATATACCTTTTAGAGAAGAATACTTAATACCAGATACTCAACCAGATGTTCATGATGTACTTTCAGTTGATACTAAAGTATATGTACTTAACAGAGAAGTTCAAAGTGATAGAGTATTATTAGAATATGAAGTTGAGTGTAATATTATGTACTTAGCTAGAGAAGAAGAAGGTTTAGGGATAAATAGCGTTATTTATAAAGAAAAAAATTCTAGCTTTATTGATATAGCTGGGGCTGAACATAGTATGATGTGTGATATGGAATGTGATTTAGAACATATCGATGCGAACATAATCAATGAAAGAAAGATAAGAGTAGAAGGAAAACTAAGAACCAAGTACAGGGTTTATAAAGAAGAAAAAATAGATGTTGTTAAAGAATTAGATGGTTTAGGTGATTTACAAATAAAAAGAAAACCAGAAAGTATAGAGAAAAATATTACAAATATGGTTTGTTCAATGAGTGGAGAATTACCTATAAACGTAGGTATGGATAAACCTCAAATAGGAAAAATAATAAAATGTGGATATATGCTTCATAGACAAGAGATAAAATTAGGAGAAGATAAAGTACAAGCATCTTGCTTAGCTAAAATTAATGTTCTTTATAGAGCTTATGATTCTAGAGAAGTTGTAGCTTTAGAAGAGGATTTATATTTATCTAATGATGAAGAGGTTGTAGGTGTAAATTCAGATATGAATTGTAATGGATATTTTGAAATCAAAGGTCATGATGTGAAGATTTCTCAAAATGATTTAGGGGAAAGTAGAATAATAGATGTTAATTTATCTGTTGATGCAAATGTTGCAATATCAAAATTAGAATTTGCAGAAACAGTTGAGGACTTATATTCACCAACGCAAAATGTAATGCCTTTAAAGGAAGTTTGCAAGATTAATATGGCTGTTAGTGAAAATTCAAATGAATCAGTAATAAAAGGAAATATAGACTTAGGAAAAAATGGAGTAGATGCTACTCAAACAGTTGATTGTAAAGGTAAAATAGTAGATATGGAAAGCTATTTTATGGATCAAAAGGTTGTTATAAAGGGTAATTTATCTGTTGAATCAATATACAAGACAACTGATGAGGAAAAGGGACTTAATAAAGTAAGTGGAGAAATTCCTTTTGAAGTTGCTTTAGATATGCCAAATTCTCAGTCTGGTATGACTTTTGATACTAAGGCTAATTTAGAAGATTTACAATGTAGTATAGAAGGAAATAGCTTAGCAGTTAAAGCAGTAGTATATTTTTATGCTAAATGTTCAGATGTTTTTGATAAAGAATATGTTAAAGATATTGAACAAAATGATGACACTGTTGAAAAGAAAGCATCCATTACTATATACACAATTCAAAAAGGTGATACTTTGTGGAATTTAGCAAAAAAATATAAGACAACAATAGATACTTTAGTTAAATTAAATGATATAGAAGATCCAGATTCTATATATGCTGGCGATAAAATTATGATTCCAGGAAGAGCAGTTTTATAA
PROTEIN sequence
Length: 536
SYIYIIVLDYLGGIHLVNLDIIKESLGFEKVLSENSLDIPFREEYLIPDTQPDVHDVLSVDTKVYVLNREVQSDRVLLEYEVECNIMYLAREEEGLGINSVIYKEKNSSFIDIAGAEHSMMCDMECDLEHIDANIINERKIRVEGKLRTKYRVYKEEKIDVVKELDGLGDLQIKRKPESIEKNITNMVCSMSGELPINVGMDKPQIGKIIKCGYMLHRQEIKLGEDKVQASCLAKINVLYRAYDSREVVALEEDLYLSNDEEVVGVNSDMNCNGYFEIKGHDVKISQNDLGESRIIDVNLSVDANVAISKLEFAETVEDLYSPTQNVMPLKEVCKINMAVSENSNESVIKGNIDLGKNGVDATQTVDCKGKIVDMESYFMDQKVVIKGNLSVESIYKTTDEEKGLNKVSGEIPFEVALDMPNSQSGMTFDTKANLEDLQCSIEGNSLAVKAVVYFYAKCSDVFDKEYVKDIEQNDDTVEKKASITIYTIQKGDTLWNLAKKYKTTIDTLVKLNDIEDPDSIYAGDKIMIPGRAVL*