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NECEvent2014_8_4_scaffold_3304_2

Organism: NECEvent2014_8_4_Clostridium_perfringens_30_8

near complete RP 49 / 55 MC: 1 BSCG 49 / 51 MC: 1 ASCG 15 / 38 MC: 1
Location: 1058..1651

Top 3 Functional Annotations

Value Algorithm Source
30S ribosomal protein S4 B n=3 Tax=Clostridium perfringens RepID=RS4B_CLOP1 similarity UNIREF
DB: UNIREF100
  • Identity: 100.0
  • Coverage: 197.0
  • Bit_score: 393
  • Evalue 1.30e-106
  • rbh
rpsD; 30S ribosomal protein S4 similarity KEGG
DB: KEGG
  • Identity: 100.0
  • Coverage: 197.0
  • Bit_score: 393
  • Evalue 3.70e-107
30S ribosomal protein S4 {ECO:0000256|HAMAP-Rule:MF_01306}; TaxID=451754 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens B str. similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 197.0
  • Bit_score: 393
  • Evalue 1.90e-106

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Taxonomy

Clostridium perfringens → Clostridium → Clostridiales → Clostridia → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 594
ATGGCTAAGATGATGGGACCTCGTTTCAAAATGTGCAGAAGACTTGGATTAAATGTAGTTGGACATCCAAAAGCAATGAAACGAGCTGATAGAGGAACAAGCAGAGCAGATAAGAAATTATCTGATTACGGTATTCAATTATTAGAAAAGCAAAGATTAAGAGCTTACTACGGTGTTATGGAAAGACAATTTACTAGATACGTAGATCAAGCTTTCAATAGTAAAGAACAACCTGGTGAGGCTTTACTTATGATTTTAGAATCAAGACTTGATAATATGGTATATAGAATGGGTTTTGCTAGCTCAATAAGACAAGCAAGACAAATGGTTAACCATGGACATTTCTTAGTAAATGGAAAGAAAGTTAATATACCATCTTTCAGATTAAATATAGGTGATGAAGTTGTTTTAAGAGAAAAATCAAGAAAAACAGAAATGTTTGTAAACAACTTTAAAGATAGCATAGGAAGTGAAGTTCCTTACGTAAGTAAAGAAGAAGATAACTTTAAAGGAATTTTCACTAGAAAGCCTAAGAGAGAAGAAATTCCAATAACAATACAAGAGCAATTAATAGTTGAATTCTATTCTAAATAA
PROTEIN sequence
Length: 198
MAKMMGPRFKMCRRLGLNVVGHPKAMKRADRGTSRADKKLSDYGIQLLEKQRLRAYYGVMERQFTRYVDQAFNSKEQPGEALLMILESRLDNMVYRMGFASSIRQARQMVNHGHFLVNGKKVNIPSFRLNIGDEVVLREKSRKTEMFVNNFKDSIGSEVPYVSKEEDNFKGIFTRKPKREEIPITIQEQLIVEFYSK*