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NECEvent2014_8_4_scaffold_3389_1

Organism: NECEvent2014_8_4_Clostridium_perfringens_30_8

near complete RP 49 / 55 MC: 1 BSCG 49 / 51 MC: 1 ASCG 15 / 38 MC: 1
Location: comp(1..1839)

Top 3 Functional Annotations

Value Algorithm Source
Sigma-54 dependent transcriptional regulator/sensory box protein n=2 Tax=Clostridium perfringens RepID=B1RPJ7_CLOPF similarity UNIREF
DB: UNIREF100
  • Identity: 99.8
  • Coverage: 613.0
  • Bit_score: 1192
  • Evalue 0.0
  • rbh
sigma-L-dependent transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 99.8
  • Coverage: 613.0
  • Bit_score: 1192
  • Evalue 0.0
Probable sigma-L-dependent transcriptional regulator {ECO:0000313|EMBL:BAB82064.1}; TaxID=195102 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostr similarity UNIPROT
DB: UniProtKB
  • Identity: 99.8
  • Coverage: 613.0
  • Bit_score: 1192
  • Evalue 0.0

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Taxonomy

Clostridium perfringens → Clostridium → Clostridiales → Clostridia → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 1839
CCCTTAGGATTACACACTAGATACTCTGCTATGATTGTTAATAAGGCTTCTGAAATAGAGTCTAAGTATAAAGTTAAACTCTATATAAAAAAAGAATCCTATACAGATTGGCTTGGAATAAGTATGCTTGCAATACTTTCTCTTAAGGTGTTGCCTAATGAAAGTATATTAATTGGATCTAAAAATGAAGGAATGATTGAAAAGTTAGCTGTTCAATCTCTTCTTGAGTTTATTGATAAAAACATAAATAATCCCATTGAATCTGAAGATAGTGAAATAGATGAAATAATAGATGCTAGCATAGTAGCTAATGAACAGGTTCTTGAAAGTTTGCCAATAGGTATTGTTGTTATAGATATAGATCAAAATATAATAACAATTAATCAATATGCTTTAAGATTTATTGGATGCAATAAAAAAGATGTTAAAGGAAAAAAGATTAATGAAGTTATTCCATCATCTCAGCTTCCTCATGTTATGCTTAGTAATTTAAAAAAGTATGGATCAACTCTTCATATAAATAACAGAGTTGGCTTAGTAAATAGCTCTCCTCTTTTCATAAACGATAAGATTATAGGGGCTGTAAGTGTTATTCAAGATGTATCTGATATTATAGGTATGAAAGAAATAAATGAGAAATTTACTAAGATACTTGAAAACTCACAGGATATGATTTGCTTTGTAGATGAAAATGGCATAATAAATTATTTAAATCCTGCATATATTAAAAACTTTTCTAAAGTTAGTTCTGATGTTATAGGAAAAAGTATTTTTGATATTGCTCCTAATGGACTTAGAGCTAAAGTATTTAAAGAAAAAACTTTATTAAAAGATGTAATTCATAAGAAAAACGGTATAAATGTTATAAGTACTATTGATCCTTTATTTATTGATGGACAGTTTAAAGGAGTTATTTCTACTTCTAGACCAGTTAGTTTAATTAAAGAACTTATGTCAAAACTAAATAAATCTGAACAAGAATTAGATTATTATAAAAATGAGTTTTTAAGACAGTTATCTAAAAATTCTTCTTTTAATAATATTATAGGTTCAACTAGAACTCTAAAGGATATAATGTACATGTGTCAAAAGGCTTCAGAAACCACATCAACTGTTCTTATTCGTGGTGAAAGTGGTACAGGTAAGGAACTTATTGCAAAGGCTATACACAATAATAGTAATAGAAAAAATAAGCCTTTTGTAAGGGTTAACTGTGCTTCAATTCCTGAAAATCTCTTAGAAAGTGAATTGTTCGGATATGAAAAGGGAGCTTTTACTGGGGCAGTTCAAAGCAAACCTGGTAAATTTGCTATTGCTGATACAGGTACTATATTCTTAGATGAAATAGGTGATATGCCCTTATCAATGCAAGTTAAACTCCTTAGAGTTTTACAAGAAAGAGAGATTGAAAGCGTAGGAGGAATAACTCCTAAAAACATTGATGTAAGAGTTATTGCTGCAACTAATAGAAATTTAGAAGAAATGATTGAAGAGGGTTCCTTTAGAGAGGATCTTTATTACAGACTTAATGTCTTAGGTATTAATCTTCCTCCACTTAGAGAACGTAAAGAAGATATTCCTGAACTCGCCGAACATTTTATAACTAAGCTAAATAAAAAGTTACATAAAACTATATTAGGAATAAAACAAGATGCCCTTAATCTACTAATTGAGTATTCTTGGCCTGGAAATATACGTGAGCTTGAAAATATAATGGAAAGGGCCATAAATCTTTGTGATGGAGATTATATAGATAGTTCTTATCTGCCTTCATATTTAAAGCCAGTTGAATCAAAGTCTTTTGATTTAAATATTGATATTGATCATATACTTCCCTTT
PROTEIN sequence
Length: 613
PLGLHTRYSAMIVNKASEIESKYKVKLYIKKESYTDWLGISMLAILSLKVLPNESILIGSKNEGMIEKLAVQSLLEFIDKNINNPIESEDSEIDEIIDASIVANEQVLESLPIGIVVIDIDQNIITINQYALRFIGCNKKDVKGKKINEVIPSSQLPHVMLSNLKKYGSTLHINNRVGLVNSSPLFINDKIIGAVSVIQDVSDIIGMKEINEKFTKILENSQDMICFVDENGIINYLNPAYIKNFSKVSSDVIGKSIFDIAPNGLRAKVFKEKTLLKDVIHKKNGINVISTIDPLFIDGQFKGVISTSRPVSLIKELMSKLNKSEQELDYYKNEFLRQLSKNSSFNNIIGSTRTLKDIMYMCQKASETTSTVLIRGESGTGKELIAKAIHNNSNRKNKPFVRVNCASIPENLLESELFGYEKGAFTGAVQSKPGKFAIADTGTIFLDEIGDMPLSMQVKLLRVLQEREIESVGGITPKNIDVRVIAATNRNLEEMIEEGSFREDLYYRLNVLGINLPPLRERKEDIPELAEHFITKLNKKLHKTILGIKQDALNLLIEYSWPGNIRELENIMERAINLCDGDYIDSSYLPSYLKPVESKSFDLNIDIDHILPF