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NECEvent2014_8_4_scaffold_3939_1

Organism: NECEvent2014_8_4_Clostridium_perfringens_30_8

near complete RP 49 / 55 MC: 1 BSCG 49 / 51 MC: 1 ASCG 15 / 38 MC: 1
Location: comp(101..1237)

Top 3 Functional Annotations

Value Algorithm Source
30S ribosomal protein S1 n=1 Tax=Clostridium perfringens F262 RepID=H7CYH4_CLOPF similarity UNIREF
DB: UNIREF100
  • Identity: 99.2
  • Coverage: 378.0
  • Bit_score: 733
  • Evalue 1.00e-208
  • rbh
rpsA; 30S ribosomal protein S1 similarity KEGG
DB: KEGG
  • Identity: 99.2
  • Coverage: 378.0
  • Bit_score: 733
  • Evalue 3.80e-209
30S ribosomal protein S1 {ECO:0000313|EMBL:EIA16352.1}; TaxID=883064 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens F262.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 99.2
  • Coverage: 378.0
  • Bit_score: 733
  • Evalue 1.50e-208

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Taxonomy

Clostridium perfringens → Clostridium → Clostridiales → Clostridia → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 1137
ATGAGTGAAAATCTTACAATGTCAGAATTAATGGATAGCTTTGAGTTAAAGCATTTTCATAAAGGTGAAATAGTTAAAGGGAAAGTTATAAGCGTAAAGAATGATGAAATAATAGTTAACATTGGTCATTTTGCAGATGGTGTGGTACCAAGAAATGAAATTTCAAATGATAAGAATTTTGATATAAATTCAATAAATGTAGATGATGATATATTTGTAATGGTATTAAGTGGAGATGATGGAGAAGGAAATGTTCTTCTATCAAAGAAAAGAGCAGATGCAATAAAGGTTTGGGATGATTTAAAAGAAGCATTTGAAGAAGAAAAATCAATAAAAGTTTCCTTAAAAGAAGTTGTTAAAGGTGGAATAGTAGGAGATTTTAATGGTCTTAGAGTATTTATGCCAGCTTCTCAATGTGCAGGAAGAAGAATAGAGAATTTAGAAGAATTAGTAGGAAAAACTTTAGCAGTTAGAGTTATAGAATTTAATAAAGATAATAGGAAAGTTGTTGTTTCAAGAAGAGTAATAGATGAAGAAATAAGAAATAATGAAAAGAAAGCTCTTTGGTCTTCAATTAAAGAAGGAGAAAAAAGAGAGGGAAAAGTAACTAGATTAGCTAAGTTTGGTGCTTTTGTCGATATTGGTGGAGTAGAAGGATTAGTTCACTTAAGTGATATGTCATGGTCAAGAGTTCATAAGCCAGAAGAGGTTGTATCAGTTGGAGATGAAGTAGAAGTATTTGTATCAGAAGTTGATATGGATAGAGAGAGAATAGCACTTTCATTAAAAGATGTTATTAAAAATCCATGGGAAACCTTAGAAGGATTAAAAGTTGGTGATGTTGTTTCTGGAAAAGTAACTAATTTTATAAAGGTTGGAGCTTTTGTTGAAGTATTACCAGGAATAGAAGGATTAGTTCATATTTCAGAAATTACTGATGAAAATATAGCTAAGCCATCAGATATTTTAGAATTAGGTCAAGAAGTTAAGGTTAAAATCTTAAATATAGATGATGAAAACAAAAAAATGAGCTTAAGTATAAAAGATGCTGTAGAAACTTCAAATGAATATATGCAGTATAATGATGAAGAGGAAGGTTATTCATTAGCTGACTTATTCAAAGGATTAAATCTATAG
PROTEIN sequence
Length: 379
MSENLTMSELMDSFELKHFHKGEIVKGKVISVKNDEIIVNIGHFADGVVPRNEISNDKNFDINSINVDDDIFVMVLSGDDGEGNVLLSKKRADAIKVWDDLKEAFEEEKSIKVSLKEVVKGGIVGDFNGLRVFMPASQCAGRRIENLEELVGKTLAVRVIEFNKDNRKVVVSRRVIDEEIRNNEKKALWSSIKEGEKREGKVTRLAKFGAFVDIGGVEGLVHLSDMSWSRVHKPEEVVSVGDEVEVFVSEVDMDRERIALSLKDVIKNPWETLEGLKVGDVVSGKVTNFIKVGAFVEVLPGIEGLVHISEITDENIAKPSDILELGQEVKVKILNIDDENKKMSLSIKDAVETSNEYMQYNDEEEGYSLADLFKGLNL*