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NECEvent2014_8_4_scaffold_102

Alias: 178_004_scaffold_102

Search features with annotation key words

Displaying 29 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
NECEvent2014_8_4_scaffold_102_1
Halorubrum coriense, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

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1..288
DNA (288bp) protein (96aa)
Uncharacterized protein n=1 Tax=Halorubrum coriense DSM 10284 RepID=M0E6D1_9EURY
Uncharacterized protein {ECO:0000313|EMBL:ELZ43360.1}; TaxID=1227466 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halorubrum.;" source="Halorubrum coriense DSM 10284.;
hypothetical protein
NECEvent2014_8_4_scaffold_102_2
Clostridium sp. BL8, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

349..936
DNA (588bp) protein (196aa)
hypothetical protein n=1 Tax=Clostridium tunisiense RepID=UPI0002E827A6
Uncharacterized protein {ECO:0000313|EMBL:EQB88130.1}; TaxID=1354301 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. BL8.;"
putative secreted protein
NECEvent2014_8_4_scaffold_102_3
Clostridium celatum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(979..1209)
DNA (231bp) protein (77aa)
Uncharacterized protein n=1 Tax=Clostridium celatum DSM 1785 RepID=L1Q7F4_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EKY23552.1}; TaxID=545697 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium celatum DSM 1785.;"
hypothetical protein
NECEvent2014_8_4_scaffold_102_4
Clostridium sp. 7_2_43FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(1298..1720)
DNA (423bp) protein (141aa)
Uncharacterized protein n=1 Tax=Clostridium sp. 7_2_43FAA RepID=V9H6Y2_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EEH97175.1}; TaxID=457396 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_2_43FAA.;"
hypothetical protein
NECEvent2014_8_4_scaffold_102_5
Clostridium colicanis, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(1801..2208)
DNA (408bp) protein (136aa)
Uncharacterized protein n=1 Tax=Clostridium colicanis 209318 RepID=N9WHW4_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:ENZ02656.1}; TaxID=999411 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium colicanis 209318.;"
hypothetical protein
NECEvent2014_8_4_scaffold_102_6
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(2268..2564)
DNA (297bp) protein (99aa)
hypothetical protein n=1 Tax=Clostridium sp. JC122 RepID=UPI00028963A6
Uncharacterized protein {ECO:0000313|EMBL:EEP54081.1}; TaxID=632245 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum E4 str. BoNT
hypothetical protein
NECEvent2014_8_4_scaffold_102_7
Lachnospiraceae bacterium 28-4, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

2713..3654
DNA (942bp) protein (314aa)
Uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 28-4 RepID=R9J7T5_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EOS30188.1}; TaxID=397287 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 28-4.;"
hypothetical protein
NECEvent2014_8_4_scaffold_102_8
Geobacillus sp. Y4.1MC1, Geobacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(3702..5111)
DNA (1410bp) protein (470aa)
6-phospho-beta-glucosidase (EC:3.2.1.86)
6-phospho-beta-glucosidase {ECO:0000313|EMBL:ADP74892.1}; EC=3.2.1.86 {ECO:0000313|EMBL:ADP74892.1};; TaxID=581103 species="Bacteria; Firmicutes; Bacilli; Bacillales; Bacillaceae; Geobacillus.;" sourc
6-phospho-beta-glucosidase n=1 Tax=Geobacillus sp. (strain Y4.1MC1) RepID=E3IFJ1_GEOS0
NECEvent2014_8_4_scaffold_102_9
Clostridium sp. CAG:265, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(5180..5494)
DNA (315bp) protein (105aa)
phosphotransferase system enzyme II PtcA (EC:2.7.1.69)
Lichenan-specific phosphotransferase enzyme iia component n=1 Tax=Clostridium sp. CAG:265 RepID=R6KTZ6_9CLOT
Lichenan-specific phosphotransferase enzyme iia component {ECO:0000313|EMBL:CDB74629.1}; TaxID=1262787 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmen
NECEvent2014_8_4_scaffold_102_10
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(5516..6877)
DNA (1362bp) protein (454aa)
N,n'-diacetylchitobiose permease iic component n=1 Tax=Clostridium butyricum E4 str. BoNT E BL5262 RepID=C4IB32_CLOBU
Permease IIC component {ECO:0000256|PIRNR:PIRNR006351}; TaxID=632245 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum E4 str. BoNT
putative cellobiose phosphotransferase enzyme IIC component
NECEvent2014_8_4_scaffold_102_11
Clostridium sp. 7_2_43FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(6920..7222)
DNA (303bp) protein (101aa)
PTS system, lactose/cellobiose family IIB component n=1 Tax=Clostridium sp. 7_2_43FAA RepID=V9H4Z8_9CLOT
PTS system, lactose/cellobiose family IIB component {ECO:0000313|EMBL:EEH99130.1}; TaxID=457396 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostri
PTS system, lactose/cellobiose family IIB component
NECEvent2014_8_4_scaffold_102_12
Clostridium saccharobutylicum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(7266..8723)
DNA (1458bp) protein (486aa)
bglC1; aryl-phospho-beta-D-glucosidase BglC (EC:3.2.1.86)
Aryl-phospho-beta-D-glucosidase BglC {ECO:0000313|EMBL:AGX42003.1}; EC=3.2.1.86 {ECO:0000313|EMBL:AGX42003.1};; TaxID=1345695 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae;
Aryl-phospho-beta-D-glucosidase BglC n=1 Tax=Clostridium saccharobutylicum DSM 13864 RepID=U5MNB7_CLOSA
NECEvent2014_8_4_scaffold_102_13
Clostridium sp. CAG:221, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(9108..9863)
DNA (756bp) protein (252aa)
Transcriptional regulator RpiR family n=1 Tax=Clostridium sp. CAG:221 RepID=R6G0X3_9CLOT rbh
Transcriptional regulator RpiR family {ECO:0000313|EMBL:CDB15184.1}; TaxID=1262780 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" sourc
RpiR family transcriptional regulator
NECEvent2014_8_4_scaffold_102_14
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(9925..10818)
DNA (894bp) protein (298aa)
Putative sugar kinase n=1 Tax=Clostridium butyricum E4 str. BoNT E BL5262 RepID=C4IB37_CLOBU
Putative sugar kinase {ECO:0000313|EMBL:EEP56413.1}; TaxID=632245 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum E4 str. BoNT E
sugar kinase
NECEvent2014_8_4_scaffold_102_15
Clostridium baratii, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(11013..15305)
DNA (4293bp) protein (1431aa)
2-hydroxyglutaryl-CoA dehydratase n=1 Tax=Clostridium pasteurianum NRRL B-598 RepID=V8FRV2_CLOPA
2-hydroxyglutaryl-CoA dehydratase {ECO:0000313|EMBL:KJU71253.1}; TaxID=1561 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium baratii.;"
putative CoA-substrate-specific enzyme activase domain protein
NECEvent2014_8_4_scaffold_102_16
Clostridium botulinum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

15486..15887
DNA (402bp) protein (134aa)
Tetratricopeptide repeat protein n=2 Tax=Clostridium botulinum B RepID=B2TNA9_CLOBB
hypothetical protein
Tetratricopeptide repeat protein {ECO:0000313|EMBL:ACD22929.2}; TaxID=935198 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium botulinum (str
NECEvent2014_8_4_scaffold_102_17
Clostridium botulinum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(16061..17131)
DNA (1071bp) protein (357aa)
Transglutaminase domain protein n=2 Tax=Clostridium botulinum B RepID=B2TNB0_CLOBB rbh
transglutaminase
Transglutaminase-like superfamily protein {ECO:0000313|EMBL:AIY81791.1}; TaxID=1415774 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium botu
NECEvent2014_8_4_scaffold_102_18
Clostridium sp. 7_2_43FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(17142..17780)
DNA (639bp) protein (213aa)
Uncharacterized protein n=1 Tax=Clostridium sp. 7_2_43FAA RepID=V9H3B9_9CLOT
Regulatory protein RecX {ECO:0000256|HAMAP-Rule:MF_01114, ECO:0000256|SAAS:SAAS00093789}; TaxID=457396 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="
recX; recombination regulator RecX
NECEvent2014_8_4_scaffold_102_19
Clostridium sp. IBUN13A, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(17788..19035)
DNA (1248bp) protein (416aa)
Peptidase, M16 family n=3 Tax=Clostridium butyricum RepID=B1QSR4_CLOBU
Uncharacterized protein {ECO:0000313|EMBL:KJZ90296.1}; TaxID=1523156 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN13A.;"
putative zinc-dependent protease
NECEvent2014_8_4_scaffold_102_20
Clostridium pasteurianum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

19214..19885
DNA (672bp) protein (224aa)
Two component transcriptional regulator, winged helix family n=2 Tax=Clostridium RepID=A6LW28_CLOB8
two component transcriptional regulator
PhoB family transcriptional regulator {ECO:0000313|EMBL:ETD66137.1}; TaxID=1428454 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium pasteuri
NECEvent2014_8_4_scaffold_102_21
Clostridium botulinum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

19885..21381
DNA (1497bp) protein (499aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=935198 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" so
Two-component sensor histidine kinase n=1 Tax=Clostridium botulinum (strain Eklund 17B / Type B) RepID=B2TNB4_CLOBB
two-component sensor histidine kinase
NECEvent2014_8_4_scaffold_102_22
Clostridium botulinum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

21727..23334
DNA (1608bp) protein (536aa)
Na/Pi cotransporter n=1 Tax=Clostridium botulinum RepID=UPI00035F9F98 rbh
Na+/Pi-cotransporter family protein {ECO:0000313|EMBL:AIY80170.1}; TaxID=1415774 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium botulinum
Na/Pi-cotransporter family protein/PhoU family protein
NECEvent2014_8_4_scaffold_102_23
Clostridium botulinum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(23563..24303)
DNA (741bp) protein (247aa)
fabG; 3-ketoacyl-ACP reductase (EC:1.1.1.100)
Oxidoreductase, short chain dehydrogenase/reductase family protein n=1 Tax=Clostridium botulinum E1 str. 'BoNT E Beluga' RepID=C5UYN8_CLOBO
Oxidoreductase, short chain dehydrogenase/reductase family protein {ECO:0000313|EMBL:EES50230.1}; TaxID=536233 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;"
NECEvent2014_8_4_scaffold_102_24
Clostridium sp. Maddingley MBC34-26, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(24320..25255)
DNA (936bp) protein (312aa)
Zn-dependent dipeptidase, microsomal dipeptidase n=1 Tax=Clostridium sp. Maddingley MBC34-26 RepID=K6UB11_9CLOT
Zn-dependent dipeptidase, microsomal dipeptidase {ECO:0000313|EMBL:EKQ56249.1}; TaxID=1196322 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridi
membrane dipeptidase family protein
NECEvent2014_8_4_scaffold_102_25
Clostridium colicanis, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(25276..26187)
DNA (912bp) protein (304aa)
Uncharacterized protein n=1 Tax=Clostridium colicanis 209318 RepID=N9Y160_9CLOT rbh
Uncharacterized protein {ECO:0000313|EMBL:ENZ01889.1}; TaxID=999411 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium colicanis 209318.;"
calcineurin-like phosphoesterase superfamily domain protein
NECEvent2014_8_4_scaffold_102_26
Clostridium sp. 7_2_43FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(26305..26811)
DNA (507bp) protein (169aa)
Anaerobic ribonucleoside-triphosphate reductase-activating protein {ECO:0000256|PIRNR:PIRNR000368}; EC=1.97.1.- {ECO:0000256|PIRNR:PIRNR000368};; TaxID=457396 species="Bacteria; Firmicutes; Clostridia
Anaerobic ribonucleoside-triphosphate reductase activating protein n=1 Tax=Clostridium sp. 7_2_43FAA RepID=V9H282_9CLOT
ribonucleoside-triphosphate reductase activating protein
NECEvent2014_8_4_scaffold_102_27
Clostridium sp. 7_2_43FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(27159..29222)
DNA (2064bp) protein (688aa)
anaerobic ribonucleoside-triphosphate reductase (EC:1.17.4.2)
Anaerobic ribonucleoside-triphosphate reductase n=1 Tax=Clostridium sp. 7_2_43FAA RepID=V9H341_9CLOT rbh
Anaerobic ribonucleoside-triphosphate reductase {ECO:0000313|EMBL:EEH97326.2}; TaxID=457396 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium
NECEvent2014_8_4_scaffold_102_28
unknown

Not on your lists

29593..30126
DNA (534bp) protein (178aa)

This feature has no annotations

NECEvent2014_8_4_scaffold_102_29
Terrisporobacter othiniensis, Terrisporobacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(30290..32677)
DNA (2388bp) protein (796aa)
hypothetical protein n=1 Tax=[Clostridium] glycolicum RepID=UPI00036D9A99 rbh
Uncharacterized protein {ECO:0000313|EMBL:KHS57285.1}; TaxID=1577792 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Terrisporobacter.;" source="Terrisporobacter othin
putative secreted protein
Displaying 29 items

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