ggKbase home page

NECEvent2014_8_4_scaffold_107

Alias: 178_004_scaffold_107

Search features with annotation key words

Displaying 30 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
NECEvent2014_8_4_scaffold_107_1
unknown

Not on your lists

1..411
DNA (411bp) protein (137aa)

This feature has no annotations

NECEvent2014_8_4_scaffold_107_2
unknown

Not on your lists

comp(529..1338)
DNA (810bp) protein (270aa)

This feature has no annotations

NECEvent2014_8_4_scaffold_107_3
Clostridium paraputrificum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(1459..2700)
DNA (1242bp) protein (414aa)
Beta-N-acetylhexosaminidase {ECO:0000256|SAAS:SAAS00114579}; EC=3.2.1.52 {ECO:0000256|SAAS:SAAS00114579};; TaxID=29363 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostri
Beta-N-acetylglucosaminidase n=1 Tax=Clostridium paraputrificum RepID=Q84IZ5_9CLOT rbh
anhydromuramoyl-peptideexo-beta-N-acetylglucosaminidase
NECEvent2014_8_4_scaffold_107_4
Eubacterium hallii CAG:12, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(2892..3482)
DNA (591bp) protein (197aa)
Putative thiamine-phosphate diphosphorylase n=1 Tax=Eubacterium hallii CAG:12 RepID=R6G3B0_9FIRM
Putative thiamine-phosphate diphosphorylase {ECO:0000313|EMBL:CDB18815.1}; TaxID=1263078 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;"
hypothetical protein
NECEvent2014_8_4_scaffold_107_5
Eubacterium sp. CAG:202, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(3475..4626)
DNA (1152bp) protein (384aa)
Tyrosine lyase ThiH n=1 Tax=Eubacterium sp. CAG:202 RepID=R6MT22_9FIRM rbh
Tyrosine lyase ThiH {ECO:0000313|EMBL:CDC02868.1}; TaxID=1262884 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp.
hypothetical protein
NECEvent2014_8_4_scaffold_107_6
Clostridium sporogenes, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(4639..5415)
DNA (777bp) protein (259aa)
Thiazole synthase {ECO:0000256|HAMAP-Rule:MF_00443}; EC=2.8.1.10 {ECO:0000256|HAMAP-Rule:MF_00443};; TaxID=1075091 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium
thiG; thiazole synthase ThiG (EC:2.8.1.10)
Thiazole synthase n=1 Tax=Clostridium sporogenes PA 3679 RepID=G9F1V3_CLOSG rbh
NECEvent2014_8_4_scaffold_107_7
Clostridium saccharoperbutylacetonicum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(5421..6230)
DNA (810bp) protein (270aa)
thiF1; thiamine biosynthesis protein ThiF (EC:2.7.7.-)
Thiamine biosynthesis protein ThiF {ECO:0000313|EMBL:AGF58655.1}; EC=2.7.7.- {ECO:0000313|EMBL:AGF58655.1};; TaxID=931276 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clos
Thiamine biosynthesis protein ThiF n=1 Tax=Clostridium saccharoperbutylacetonicum N1-4(HMT) RepID=M1LZE0_9CLOT
NECEvent2014_8_4_scaffold_107_8
Blautia sp. CAG:257, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(6233..6430)
DNA (198bp) protein (66aa)
Thiamine biosynthesis protein ThiS n=1 Tax=Blautia sp. CAG:257 RepID=R5WSD4_9FIRM
Thiamine biosynthesis protein ThiS {ECO:0000313|EMBL:CDA06308.1}; TaxID=1262756 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia; environmental samples.;" source="Bla
thiamine biosynthesis protein ThiS
NECEvent2014_8_4_scaffold_107_9
Clostridium sp. 7_2_43FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(6565..8076)
DNA (1512bp) protein (504aa)
Uncharacterized protein n=1 Tax=Clostridium sp. 7_2_43FAA RepID=V9H3M7_9CLOT rbh
Uncharacterized protein {ECO:0000313|EMBL:EEH98650.1}; TaxID=457396 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_2_43FAA.;"
hypothetical protein
NECEvent2014_8_4_scaffold_107_10
Clostridium sp. 7_2_43FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(8133..9398)
DNA (1266bp) protein (422aa)
Uncharacterized protein n=1 Tax=Clostridium sp. 7_2_43FAA RepID=V9H844_9CLOT rbh
Uncharacterized protein {ECO:0000313|EMBL:EEH98651.1}; TaxID=457396 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_2_43FAA.;"
bacterial extracellular solute-binding family protein
NECEvent2014_8_4_scaffold_107_11
Clostridium baratii, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(9417..10712)
DNA (1296bp) protein (432aa)
Uncharacterized protein n=1 Tax=Clostridium sp. 7_2_43FAA RepID=V9HH78_9CLOT rbh
Beta-lactamase {ECO:0000313|EMBL:KJU72889.1}; TaxID=1561 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium baratii.;"
hypothetical protein
NECEvent2014_8_4_scaffold_107_12
Clostridium sp. 7_2_43FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(10696..11514)
DNA (819bp) protein (273aa)
Uncharacterized protein n=1 Tax=Clostridium sp. 7_2_43FAA RepID=V9HFL9_9CLOT rbh
Uncharacterized protein {ECO:0000313|EMBL:EEH98653.2}; TaxID=457396 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_2_43FAA.;"
binding--dependent transport system inner membrane component family protein
NECEvent2014_8_4_scaffold_107_13
Clostridium sp. 7_2_43FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(11523..12425)
DNA (903bp) protein (301aa)
Uncharacterized protein n=1 Tax=Clostridium sp. 7_2_43FAA RepID=V9H4H5_9CLOT rbh
Uncharacterized protein {ECO:0000313|EMBL:EEH98654.1}; TaxID=457396 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_2_43FAA.;"
binding--dependent transport system inner membrane component family protein
NECEvent2014_8_4_scaffold_107_14
Clostridium sp. 7_2_43FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(12406..13476)
DNA (1071bp) protein (357aa)
Uncharacterized protein n=1 Tax=Clostridium sp. 7_2_43FAA RepID=V9H3M9_9CLOT rbh
Uncharacterized protein {ECO:0000313|EMBL:EEH98655.1}; TaxID=457396 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_2_43FAA.;"
ABC transporter family protein
NECEvent2014_8_4_scaffold_107_15
Clostridium celatum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(13964..14428)
DNA (465bp) protein (155aa)
Uncharacterized protein n=1 Tax=Clostridium celatum DSM 1785 RepID=L1QFJ8_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EKY26726.1}; TaxID=545697 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium celatum DSM 1785.;"
NECEvent2014_8_4_scaffold_107_16
unknown

Not on your lists

comp(14421..14540)
DNA (120bp) protein (40aa)

This feature has no annotations

NECEvent2014_8_4_scaffold_107_17
Enterococcus malodoratus, Enterococcus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(14784..15590)
DNA (807bp) protein (269aa)
Uncharacterized protein n=1 Tax=Enterococcus malodoratus ATCC 43197 RepID=R2NR49_9ENTE
Uncharacterized protein {ECO:0000313|EMBL:EOH73443.1}; TaxID=1158601 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Enterococcaceae; Enterococcus.;" source="Enterococcus malodoratus ATCC 431
RpiR family transcriptional regulator
NECEvent2014_8_4_scaffold_107_18
Enterococcus malodoratus, Enterococcus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(15682..17241)
DNA (1560bp) protein (520aa)
PTS system, glucose-like IIB component n=1 Tax=Enterococcus malodoratus ATCC 43197 RepID=R2QYB9_9ENTE rbh
PTS system, glucose-like IIB component {ECO:0000313|EMBL:EOH73416.1}; TaxID=1158601 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Enterococcaceae; Enterococcus.;" source="Enterococcus malod
PTS system, glucose-like IIB subunint
NECEvent2014_8_4_scaffold_107_19
Enterococcus malodoratus, Enterococcus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(17267..18595)
DNA (1329bp) protein (443aa)
maltose-6'-phosphate glucosidase (EC:3.2.1.122)
Uncharacterized protein n=1 Tax=Enterococcus malodoratus ATCC 43197 RepID=R2RBU7_9ENTE rbh
Uncharacterized protein {ECO:0000313|EMBL:EOH73419.1}; TaxID=1158601 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Enterococcaceae; Enterococcus.;" source="Enterococcus malodoratus ATCC 431
NECEvent2014_8_4_scaffold_107_20
[Clostridium] hiranonis, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(18849..19259)
DNA (411bp) protein (137aa)
Universal stress family protein n=1 Tax=Clostridium hiranonis DSM 13275 RepID=B6G167_9FIRM
Universal stress family protein {ECO:0000313|EMBL:EEA84473.1}; TaxID=500633 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="[Clostridium] h
universal stress protein
NECEvent2014_8_4_scaffold_107_21
Clostridium botulinum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(19491..20180)
DNA (690bp) protein (230aa)
hypothetical protein n=1 Tax=[Clostridium] glycolicum RepID=UPI00036E0FFF rbh
hypothetical protein
Putative membrane protein {ECO:0000313|EMBL:CAL82154.1}; TaxID=441771 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium botulinum (strain Hal
NECEvent2014_8_4_scaffold_107_22
Clostridium saccharobutylicum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(20182..20637)
DNA (456bp) protein (152aa)
hypothetical protein n=1 Tax=[Clostridium] glycolicum RepID=UPI00037B3142
response regulator of the LytR/AlgR family
Response regulator of the LytR/AlgR family {ECO:0000313|EMBL:AGX43446.1}; TaxID=1345695 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sac
NECEvent2014_8_4_scaffold_107_23
Coprobacillus sp. CAG:698, Tenericutes, Bacteria

Not on your lists

comp(20836..21549)
DNA (714bp) protein (238aa)
hypothetical protein n=1 Tax=[Clostridium] glycolicum RepID=UPI00036FE9E3 rbh
Uncharacterized protein {ECO:0000313|EMBL:CCY08336.1}; TaxID=1262856 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus; environmental samples.;" s
hypothetical protein
NECEvent2014_8_4_scaffold_107_24
Clostridium botulinum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(21567..24287)
DNA (2721bp) protein (907aa)
Putative uncharacterized protein n=1 Tax=Clostridium botulinum E1 str. 'BoNT E Beluga' RepID=C5UTF7_CLOBO rbh
Uncharacterized protein {ECO:0000313|EMBL:EES49283.1}; TaxID=536233 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium botulinum E1 str. 'BoNT
hypothetical protein
NECEvent2014_8_4_scaffold_107_25
Clostridium botulinum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

24458..25345
DNA (888bp) protein (296aa)
Uncharacterized protein n=1 Tax=Clostridium botulinum (strain Loch Maree / Type A3) RepID=B1KWF6_CLOBM rbh
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACA56000.1}; TaxID=498214 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium botulinum (strain Loch
NECEvent2014_8_4_scaffold_107_26
Clostridium chauvoei, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

25529..26560
DNA (1032bp) protein (344aa)
Putative Anaerobic sulfite reductase, A subunit n=1 Tax=Clostridium chauvoei JF4335 RepID=S6F2P5_9CLOT rbh
Putative Anaerobic sulfite reductase, A subunit {ECO:0000313|EMBL:CDG02891.1}; TaxID=1351755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridiu
asrA; anaerobic sulfite reductase subunit A
NECEvent2014_8_4_scaffold_107_27
Clostridium chauvoei, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

26562..27356
DNA (795bp) protein (265aa)
Putative Anaerobic sulfite reductase, B subunit n=1 Tax=Clostridium chauvoei JF4335 RepID=S6ENZ2_9CLOT rbh
Putative Anaerobic sulfite reductase, B subunit {ECO:0000313|EMBL:CDG02892.1}; TaxID=1351755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridiu
asrB; sulfite reductase, subunit B
NECEvent2014_8_4_scaffold_107_28
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

27369..28418
DNA (1050bp) protein (350aa)
Anaerobic sulfite reductase subunit C n=3 Tax=Clostridium perfringens RepID=H7CWR6_CLOPF
Anaerobic sulfite reductase subunit C {ECO:0000313|EMBL:EIA16817.1}; TaxID=883064 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringe
anaerobic sulfite reductase subunit C
NECEvent2014_8_4_scaffold_107_29
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(28749..29765)
DNA (1017bp) protein (339aa)
HRDC domain protein n=1 Tax=Clostridium perfringens NCTC 8239 RepID=B1RQR6_CLOPF
HRDC domain protein {ECO:0000313|EMBL:EDT16564.1}; TaxID=451755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens E str. JGS1987.
HRDC domain-containing protein
NECEvent2014_8_4_scaffold_107_30
Cellulosilyticum lentocellum, Cellulosilyticum, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(30123..31403)
DNA (1281bp) protein (427aa)
Cytosine-specific methyltransferase {ECO:0000256|RuleBase:RU000417}; EC=2.1.1.37 {ECO:0000256|RuleBase:RU000417};; TaxID=642492 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiracea
hypothetical protein n=1 Tax=Clostridium beijerinckii RepID=UPI00030D1BD8 rbh
DNA-cytosine methyltransferase
Displaying 30 items

View Taxonomy