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NECEvent2014_8_4_scaffold_327

Alias: 178_004_scaffold_327

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Displaying 15 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
NECEvent2014_8_4_scaffold_327_1
Weissella confusa, Weissella, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(551..2197)
DNA (1647bp) protein (549aa)
DNA repair ATPase n=1 Tax=Ornithinibacillus scapharcae RepID=UPI000225B135
DNA repair ATPase
DNA repair ATPase {ECO:0000313|EMBL:CCF29594.1}; TaxID=1127131 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Leuconostocaceae; Weissella.;" source="Weissella confusa LBAE C39-2.;"
NECEvent2014_8_4_scaffold_327_2
Clostridium cellulovorans, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(2211..3131)
DNA (921bp) protein (307aa)
DNA repair ATPase n=1 Tax=Clostridium cellulovorans (strain ATCC 35296 / DSM 3052 / OCM 3 / 743B) RepID=D9SLQ0_CLOC7
DNA repair ATPase
DNA repair ATPase {ECO:0000313|EMBL:ADL53687.1}; TaxID=573061 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium cellulovorans (strain ATCC 35
NECEvent2014_8_4_scaffold_327_3
Clostridium cellulovorans, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(3136..3540)
DNA (405bp) protein (135aa)
Putative uncharacterized protein n=1 Tax=Clostridium cellulovorans (strain ATCC 35296 / DSM 3052 / OCM 3 / 743B) RepID=D9SLQ1_CLOC7
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADL53688.1}; TaxID=573061 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium cellulovorans (strain A
NECEvent2014_8_4_scaffold_327_4
Cerapachys biroi, Cerapachys, Hymenoptera, Neoptera, Arthropoda, Metazoa

Not on your lists

comp(3547..6432)
DNA (2886bp) protein (962aa)
Laminin subunit alpha-2 {ECO:0000313|EMBL:EZA47591.1}; TaxID=443821 species="Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Hymenoptera; Apocrita; Ac
NECEvent2014_8_4_scaffold_327_5
Clostridium sp. IBUN13A, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(6524..7522)
DNA (999bp) protein (333aa)
hypothetical protein n=1 Tax=Clostridium tunisiense RepID=UPI0003078E35 rbh
Uncharacterized protein {ECO:0000313|EMBL:KJZ97847.1}; TaxID=1523156 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN13A.;"
hypothetical protein
NECEvent2014_8_4_scaffold_327_6
Clostridium sp. IBUN13A, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(7588..8163)
DNA (576bp) protein (192aa)
Diguanylate cyclase/phosphodiesterase domain 2 n=1 Tax=Clostridium novyi (strain NT) RepID=A0Q1G3_CLONN
Uncharacterized protein {ECO:0000313|EMBL:KJZ97849.1}; TaxID=1523156 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN13A.;"
diguanylate cyclase/phosphodiesterase
NECEvent2014_8_4_scaffold_327_7

Not on your lists

comp(8368..8628)
DNA (261bp) protein (87aa)
Uncharacterized protein n=1 Tax=Clostridium butyricum 60E.3 RepID=R0ATJ2_CLOBU
Uncharacterized protein {ECO:0000313|EMBL:ETJ21945.1}; TaxID=408170 species="unclassified sequences; metagenomes; organismal metagenomes.;" source="human gut metagenome.;"
hypothetical protein
NECEvent2014_8_4_scaffold_327_8
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(8642..9898)
DNA (1257bp) protein (419aa)
dinB; DNA polymerase IV (EC:2.7.7.7)
Uncharacterized protein n=1 Tax=Clostridium butyricum 60E.3 RepID=R0AG60_CLOBU rbh
Uncharacterized protein {ECO:0000313|EMBL:ENZ35363.1}; TaxID=997898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum 60E.3.;"
NECEvent2014_8_4_scaffold_327_9

Not on your lists

comp(10065..10298)
DNA (234bp) protein (78aa)
Uncharacterized protein {ECO:0000313|EMBL:ETJ20797.1}; Flags: Fragment;; TaxID=408170 species="unclassified sequences; metagenomes; organismal metagenomes.;" source="human gut metagenome.;"
NECEvent2014_8_4_scaffold_327_10

Not on your lists

10330..10905
DNA (576bp) protein (192aa)
Uncharacterized protein n=1 Tax=Clostridium chauvoei JF4335 RepID=S6FB39_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:ETJ20799.1}; TaxID=408170 species="unclassified sequences; metagenomes; organismal metagenomes.;" source="human gut metagenome.;"
NECEvent2014_8_4_scaffold_327_11
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(10959..11810)
DNA (852bp) protein (284aa)
Uncharacterized protein n=1 Tax=Clostridium butyricum 60E.3 RepID=R0ARH4_CLOBU rbh
Uncharacterized protein {ECO:0000313|EMBL:ENZ35364.1}; TaxID=997898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum 60E.3.;"
hypothetical protein
NECEvent2014_8_4_scaffold_327_12

Not on your lists

12073..12669
DNA (597bp) protein (199aa)
Sigma-70 family RNA polymerase sigma factor n=1 Tax=Clostridium butyricum 60E.3 RepID=N9Z6P3_CLOBU rbh
Sigma-70 region 2 protein {ECO:0000313|EMBL:ETJ20801.1}; TaxID=408170 species="unclassified sequences; metagenomes; organismal metagenomes.;" source="human gut metagenome.;"
sigma-70 region 2 domain-containing protein
NECEvent2014_8_4_scaffold_327_13
Dialister succinatiphilus, Dialister, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(12712..13110)
DNA (399bp) protein (133aa)
Putative uncharacterized protein n=1 Tax=Dialister succinatiphilus YIT 11850 RepID=H1D2Q4_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHO62174.1}; TaxID=742743 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Dialister.;" source="Dialister succinatiphilus YIT 1
transposase C for
NECEvent2014_8_4_scaffold_327_14
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(13231..15075)
DNA (1845bp) protein (615aa)
Site-specific recombinase, phage integrase family protein n=1 Tax=Clostridium perfringens CPE str. F4969 RepID=B1RDP5_CLOPF rbh
Site-specific recombinase, phage integrase family protein {ECO:0000313|EMBL:EDT27943.1}; TaxID=451756 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="C
integrase family protein
NECEvent2014_8_4_scaffold_327_15
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(15062..16744)
DNA (1683bp) protein (561aa)
Transposase B for n=1 Tax=Clostridium perfringens CPE str. F4969 RepID=B1RDP6_CLOPF rbh
Transposase B for {ECO:0000313|EMBL:EDT28065.1}; TaxID=451756 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens CPE str. F4969.;"
femA; Transposase B
Displaying 15 items

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