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NECEvent2014_8_4_scaffold_340

Alias: 178_004_scaffold_340

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Displaying 18 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
NECEvent2014_8_4_scaffold_340_1
Clostridium sp. CAG:1219, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(42..578)
DNA (537bp) protein (179aa)
Putative flavodoxin n=1 Tax=Clostridium sp. CAG:1219 RepID=R5SZ07_9CLOT
Putative flavodoxin {ECO:0000313|EMBL:CCZ56129.1}; TaxID=1262772 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp.
flavodoxin
NECEvent2014_8_4_scaffold_340_2
Lachnoclostridium phytofermentans, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(602..1186)
DNA (585bp) protein (195aa)
Transcriptional regulator, TetR family n=1 Tax=Clostridium phytofermentans (strain ATCC 700394 / DSM 18823 / ISDg) RepID=A9KSZ6_CLOPH
TetR family transcriptional regulator
Transcriptional regulator, TetR family {ECO:0000313|EMBL:ABX42207.1}; Flags: Precursor;; TaxID=357809 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Clostridium p
NECEvent2014_8_4_scaffold_340_3
Clostridium botulinum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(1566..1970)
DNA (405bp) protein (135aa)
hypothetical protein n=1 Tax=Clostridium botulinum RepID=UPI0003133235
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACD22068.1}; TaxID=935198 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium botulinum (strain Eklun
NECEvent2014_8_4_scaffold_340_4
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(2137..2478)
DNA (342bp) protein (114aa)
PhnA family protein n=9 Tax=Clostridium perfringens RepID=H7CZU8_CLOPF
phnA; phnA family protein
PhnA family protein {ECO:0000313|EMBL:EDT70746.1}; TaxID=488537 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens D str. JGS1721.
NECEvent2014_8_4_scaffold_340_5
Clostridium sp. 7_2_43FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(2548..3435)
DNA (888bp) protein (296aa)
Uncharacterized protein n=1 Tax=Clostridium sp. 7_2_43FAA RepID=V9HF78_9CLOT rbh
Uncharacterized protein {ECO:0000313|EMBL:EEH97100.1}; TaxID=457396 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_2_43FAA.;"
LysR-family transcriptional regulator
NECEvent2014_8_4_scaffold_340_6
Clostridium botulinum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

3554..4747
DNA (1194bp) protein (398aa)
Uncharacterized protein n=2 Tax=Clostridium botulinum B RepID=B2TM94_CLOBB rbh
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACD25131.1}; TaxID=935198 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium botulinum (strain Eklun
NECEvent2014_8_4_scaffold_340_7
Clostridium sp. 7_2_43FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(4800..6395)
DNA (1596bp) protein (532aa)
beta-hexosaminidase (EC:3.2.1.52)
beta-N-acetylhexosaminidase n=1 Tax=Clostridium sp. JC122 RepID=UPI00028A3FC2
Uncharacterized protein {ECO:0000313|EMBL:EEH98644.1}; TaxID=457396 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_2_43FAA.;"
NECEvent2014_8_4_scaffold_340_8
Clostridium pasteurianum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(6542..7132)
DNA (591bp) protein (197aa)
hypothetical protein n=1 Tax=Clostridium beijerinckii RepID=UPI0002E2DCB6
membrane protein
Glycerol-3-phosphate acyltransferase {ECO:0000256|HAMAP-Rule:MF_01043}; Acyl-PO4 G3P acyltransferase {ECO:0000256|HAMAP-Rule:MF_01043}; Acyl-phosphate--glycerol-3-phosphate acyltransferase {ECO:000025
NECEvent2014_8_4_scaffold_340_9
Clostridium sp. CAG:221, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(7205..7837)
DNA (633bp) protein (211aa)
Pentapeptide repeat-containing protein n=1 Tax=Clostridium sp. CAG:221 RepID=R6GLX8_9CLOT
Pentapeptide repeat-containing protein {ECO:0000313|EMBL:CDB15162.1}; TaxID=1262780 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" sour
pentapeptide repeat protein
NECEvent2014_8_4_scaffold_340_10
Clostridium botulinum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

8014..8334
DNA (321bp) protein (107aa)
Putative uncharacterized protein n=1 Tax=Clostridium botulinum (strain Alaska E43 / Type E3) RepID=B2UZT6_CLOBA
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:KIL09666.1}; TaxID=1491 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium botulinum.;"
NECEvent2014_8_4_scaffold_340_11
Clostridium colicanis, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(8424..9107)
DNA (684bp) protein (228aa)
Lipoprotein-releasing system ATP-binding protein LolD {ECO:0000256|HAMAP-Rule:MF_01708}; EC=3.6.3.- {ECO:0000256|HAMAP-Rule:MF_01708};; TaxID=999411 species="Bacteria; Firmicutes; Clostridia; Clostrid
Lipoprotein-releasing ABC transporter ATP-binding protein n=1 Tax=Clostridium colicanis 209318 RepID=N9XML2_9CLOT rbh
ABC transporter
NECEvent2014_8_4_scaffold_340_12
Clostridium colicanis, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(9117..10274)
DNA (1158bp) protein (386aa)
Uncharacterized protein n=1 Tax=Clostridium colicanis 209318 RepID=N9XYE6_9CLOT rbh
Uncharacterized protein {ECO:0000313|EMBL:ENZ00949.1}; TaxID=999411 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium colicanis 209318.;"
hypothetical protein
NECEvent2014_8_4_scaffold_340_13
Gottschalkia acidurici, Gottschalkia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

10432..11133
DNA (702bp) protein (234aa)
Signal transduction response regulator n=1 Tax=Clostridium acidurici (strain ATCC 7906 / DSM 604 / KCTC 5404 / 9a) RepID=K0B2V8_CLOA9 rbh
signal transduction response regulator
Signal transduction response regulator {ECO:0000313|EMBL:AFS78941.1}; TaxID=1128398 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Gottschalkia.;" source="Clostridium acidurici (strain ATCC
NECEvent2014_8_4_scaffold_340_14
Gottschalkia acidurici, Gottschalkia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

11123..12496
DNA (1374bp) protein (458aa)
sensor signal transduction histidine kinase (EC:2.7.13.3)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=1128398 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Gottschalkia.;" source="Clostrid
Sensor signal transduction histidine kinase n=1 Tax=Clostridium acidurici (strain ATCC 7906 / DSM 604 / KCTC 5404 / 9a) RepID=K0B1Z6_CLOA9 rbh
NECEvent2014_8_4_scaffold_340_15
Clostridium sartagoforme, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(12542..13834)
DNA (1293bp) protein (431aa)
Enolase {ECO:0000256|HAMAP-Rule:MF_00318}; EC=4.2.1.11 {ECO:0000256|HAMAP-Rule:MF_00318};; 2-phospho-D-glycerate hydro-lyase {ECO:0000256|HAMAP-Rule:MF_00318}; 2-phosphoglycerate dehydratase {ECO:0000
Enolase n=1 Tax=Clostridium sartagoforme AAU1 RepID=R9BWK9_9CLOT rbh
eno; phosphopyruvate hydratase
NECEvent2014_8_4_scaffold_340_16
Clostridium sartagoforme, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(14135..14806)
DNA (672bp) protein (224aa)
TrkA domain-containing protein n=1 Tax=Clostridium sartagoforme AAU1 RepID=R9BVD4_9CLOT
TrkA domain-containing protein {ECO:0000313|EMBL:EOR20670.1}; TaxID=1202534 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sartagoforme AA
TrkA domain-containing protein
NECEvent2014_8_4_scaffold_340_17
Clostridium sp. 7_2_43FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(14816..16108)
DNA (1293bp) protein (431aa)
H(+)-transporting two-sector ATPase (EC:3.6.3.14)
TrkH family potassium uptake protein n=1 Tax=Clostridium sp. 7_2_43FAA RepID=V9H385_9CLOT rbh
TrkH family potassium uptake protein {ECO:0000313|EMBL:EEH97473.1}; TaxID=457396 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_2_43
NECEvent2014_8_4_scaffold_340_18
unknown

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comp(16086..16172)
DNA (87bp) protein (29aa)

This feature has no annotations

Displaying 18 items

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