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NECEvent2014_8_4_scaffold_0_1

Organism: NECEvent2014_8_4_Clostridium_paraputrificum_31_73

near complete RP 50 / 55 BSCG 51 / 51 ASCG 15 / 38 MC: 2
Location: comp(2..526)

Top 3 Functional Annotations

Value Algorithm Source
yciB; putative L,D-transpeptidase YciB (EC:2.-.-.-) similarity KEGG
DB: KEGG
  • Identity: 37.0
  • Coverage: 181.0
  • Bit_score: 124
  • Evalue 2.20e-26
Putative L,D-transpeptidase YciB n=1 Tax=Clostridium saccharobutylicum DSM 13864 RepID=U5MJW5_CLOSA similarity UNIREF
DB: UNIREF100
  • Identity: 37.0
  • Coverage: 181.0
  • Bit_score: 124
  • Evalue 7.80e-26
Putative L,D-transpeptidase {ECO:0000313|EMBL:AGF53860.1}; TaxID=931276 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium saccharoperbutylace similarity UNIPROT
DB: UniProtKB
  • Identity: 38.8
  • Coverage: 170.0
  • Bit_score: 124
  • Evalue 1.10e-25

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Taxonomy

Clostridium saccharoperbutylacetonicum → Clostridium → Clostridiales → Clostridia → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 525
ATGTATAATAATAGCTCGCATTTATTTGTTAATAATAAACATAATAAATCAAATTTCAAATTATATTTATCTATTCTACTTTTTGTATTAATTATAGTATCTGTAATTATATATGAATTTTTTAGTTATAAATTATTGGTACGTAACTTTACCTATTATTTTGATGAAAAGAAGTTTTCTAATGCAAATAACATTGTATTAACTACAGAAAACCTTAACCCATTTAAGGCTATCTTATTAGAAAAAGACCTTTCTCAATACTTTAACGATAAATTAGATTATTTATCTGAAGCTATTTCTGATGAAGATATGTCTTTAAATGATGCTCTCGACATAACTAAAGAAATATATAGATATAACTTATCTTCTTCAGATAATACTTCACTTTTCACTAGTTCAGATAATAATGATTTTAATAAAGGCGTATCTCTATTTAATTCACAGGAATATGCCAAGGCATATGATTCATTTAATAAAATTAATTCTAGTGACTCTGAATATAAAAATGCTCTATCCTATATGGAT
PROTEIN sequence
Length: 175
MYNNSSHLFVNNKHNKSNFKLYLSILLFVLIIVSVIIYEFFSYKLLVRNFTYYFDEKKFSNANNIVLTTENLNPFKAILLEKDLSQYFNDKLDYLSEAISDEDMSLNDALDITKEIYRYNLSSSDNTSLFTSSDNNDFNKGVSLFNSQEYAKAYDSFNKINSSDSEYKNALSYMD