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NECEvent2014_8_4_scaffold_0_43

Organism: NECEvent2014_8_4_Clostridium_paraputrificum_31_73

near complete RP 50 / 55 BSCG 51 / 51 ASCG 15 / 38 MC: 2
Location: 47588..48277

Top 3 Functional Annotations

Value Algorithm Source
Helix-turn-helix domain protein n=1 Tax=Clostridium sp. CAG:265 RepID=R6KVE1_9CLOT similarity UNIREF
DB: UNIREF100
  • Identity: 64.6
  • Coverage: 229.0
  • Bit_score: 298
  • Evalue 5.20e-78
Helix-turn-helix domain protein {ECO:0000313|EMBL:CDB73911.1}; TaxID=1262787 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clo similarity UNIPROT
DB: UniProtKB
  • Identity: 64.2
  • Coverage: 229.0
  • Bit_score: 297
  • Evalue 2.10e-77
helix-turn-helix domain protein similarity KEGG
DB: KEGG
  • Identity: 60.9
  • Coverage: 230.0
  • Bit_score: 282
  • Evalue 1.40e-73

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Taxonomy

Clostridium sp. CAG:265 → Clostridium → Clostridiales → Clostridia → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 690
GTGAGTAGAGTAGGGGAGAAGATCAAGGAAGCAAGAACAAAAGCTGGTCTTACTCAAAAGGCTTTAGGAAAAAAGTTAGGTGTATCTGATAAATTTATTAACGAAGTAGAAATGGGAAGAAGAGTTGCTCAAGAAGGATTCATAGAAAGAGCAGCAAAAATCCTTAATACAGATTTAAATGATATAAGTATGGTTGTAACAGATGAAGCATTAATGGAAGAAAGAAAGATAACAGAAGTTGCTAAAAAGGAGAAGAAGATTAATGCCAAAATACTTGGAGAAACTTCACCTGTGTGGACTGATGCTTTTTCATCTGTAATGAAAAAGGTAATAATATATGACTATAGCTTAAAAAAGGAGTTAGGAAGTAAAGAACTTCCTATATACTCAAATAAGGTAGAAGGATACCCTGCAGATAAAGTTTTATATATAAAAGTAGAAGATAATAGTATGTCTGGATTCAGAATGATGAAGGATGATATAGTATTTGGTCATTTAGTTAAAGAAGTGAGCAACAATGGAATGTTTCTTATAGAGTATGACAATAAAAGAGTTATAAGACAAATAAAGAGTTTAGGTGAGCAAAAGTTATTACTTATAGGTAATGATGGCTCAGCTAAGACAGAAACAATACAAGTGAAAGAAGCTAAAATTATAGCTAAGTTAGAAAGATTAGAAATACAACTTTAG
PROTEIN sequence
Length: 230
VSRVGEKIKEARTKAGLTQKALGKKLGVSDKFINEVEMGRRVAQEGFIERAAKILNTDLNDISMVVTDEALMEERKITEVAKKEKKINAKILGETSPVWTDAFSSVMKKVIIYDYSLKKELGSKELPIYSNKVEGYPADKVLYIKVEDNSMSGFRMMKDDIVFGHLVKEVSNNGMFLIEYDNKRVIRQIKSLGEQKLLLIGNDGSAKTETIQVKEAKIIAKLERLEIQL*