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NECEvent2014_8_4_scaffold_0_50

Organism: NECEvent2014_8_4_Clostridium_paraputrificum_31_73

near complete RP 50 / 55 BSCG 51 / 51 ASCG 15 / 38 MC: 2
Location: 58204..59757

Top 3 Functional Annotations

Value Algorithm Source
Glycine betaine/L-proline ABC transporter, permease/glycine betaine/L-proline-binding protein n=1 Tax=Clostridium perfringens CPE str. F4969 RepID=B1RD91_CLOPF similarity UNIREF
DB: UNIREF100
  • Identity: 63.6
  • Coverage: 517.0
  • Bit_score: 673
  • Evalue 1.30e-190
ABC transporter permease {ECO:0000313|EMBL:KJU71886.1}; TaxID=1561 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium baratii.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 64.9
  • Coverage: 516.0
  • Bit_score: 679
  • Evalue 4.50e-192
binding--dependent transport system inner membrane component family protein similarity KEGG
DB: KEGG
  • Identity: 64.3
  • Coverage: 516.0
  • Bit_score: 673
  • Evalue 6.40e-191

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Taxonomy

Clostridium baratii → Clostridium → Clostridiales → Clostridia → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 1554
ATGAGTAACTTTTTTAGTTTCATTTTAGAAAGGAAAGAGCAAATATTATCACTATTAGTAGAGCATACGTTTTTAACTATGTTAGCAATTGCTTTAGCTATATTAATAGGAATTCCTTTAGGTATACTTATTACAAATATTAAGCCTCTAAGAAAACCTATATTAGGATTAATCAATACATTGCAAGCAGTGCCATCTATGGCTTTATTAGGATTACTTATTCCATTACTTGGAATAGGAACTGTTCCTGCTATAACTACTGTTGTTTTATACTCTCTTTTGCCAATAGTAAAGAATACTTTTACTGCACTGACTAATATAGATGAAAATATGTTAGAAGCAGCAAGAGGAATGGGATTAACAAAAAGACAAACATTAATTAAGATAAAGATACCAGTATCTTTGCCATTAATTATGTCTGGAGTAAGAATATCTGCGGTGACATCAGTGGGATTAATGACCTTAGCTGCTTTTATAGGGGCTGGAGGTCTAGGGTATCTGGTATTTACAGGTGTACAAACAGTAAATAACAATATGATTTTAGCAGGAGCTATACCAGCTTGTATTTTAGCCTTAATTATAGATTTTATATTTGGAAAGATTGAAGTTGCAGTAACTCCTGTTGGACTTTTATCTAATGGGAAGAAAAATAATAATAAGATCCTTAAGGTAATTGGAGTTATACTAGCTATTTTATTAGTGTTTACAGGTATATCTAATATATTTAAGGAAAAAAAAGGTGACACAATTGTAGTAGGATCAAAAAATTATTCAGAACAATTAATTTTAGCAAATATGGTGGCAGATTTAATAGAAGAAAAAACTGACCTTAATGTAGAAAGAAAATTAAATTTAGGAGGAAGCTCTGTTGTGTCATCAGCTATACAAAAAGGAGAGATTGATATGTATGTTGACTATACAGGGTCTTTACTACTAAATATATTAGGAGAACCATTAATAAGAGATAAAGATGAAATTTATAATAGAAGTAAAGAGTTAATGGAGGAGCGATATAGTTTAACATTATTAAATCCACTTGGTTTTAATAATACTTATACAATAGCAACAACTAAAGAAATTGCAGAGAAATATAATGTAAAAAAAGTATCTGATTTAGCTAAGTATAATGAGGAATTTGTAATCAGCCCTACAATGGAGTTTGTTAATAGAGATGATGGATTAAATGAATTAAGTAAATTATATGGATTGAAGTTTAAAAGTATAAAGGCTATGGATGGAAGTCTTAGATATTCAGCTTTAAAAAGTGGTGATTGTCAATTTATTGATGCATTCTCTACAGAGGGATTATTAAAGGCCTTTGATTTACAAGTTTTAGAGGATGATAAAGAATTCTTTCCTCCATATAATGCAGTTCCTGTTATTAGAATGGATACCTTAGAAAAATATCCTGAGCTAAAAGAAGTCTTAGCTGTATTAGATGGAAAAATAGATGAAGAAGCTATGATCGATTTAAATTATAAAGTTGATAAATTAAGCAAATCTCCTGAAGAGGTGGCTAGAGAATTTTTAGTATCAGAAGGTTTAATAGAATAA
PROTEIN sequence
Length: 518
MSNFFSFILERKEQILSLLVEHTFLTMLAIALAILIGIPLGILITNIKPLRKPILGLINTLQAVPSMALLGLLIPLLGIGTVPAITTVVLYSLLPIVKNTFTALTNIDENMLEAARGMGLTKRQTLIKIKIPVSLPLIMSGVRISAVTSVGLMTLAAFIGAGGLGYLVFTGVQTVNNNMILAGAIPACILALIIDFIFGKIEVAVTPVGLLSNGKKNNNKILKVIGVILAILLVFTGISNIFKEKKGDTIVVGSKNYSEQLILANMVADLIEEKTDLNVERKLNLGGSSVVSSAIQKGEIDMYVDYTGSLLLNILGEPLIRDKDEIYNRSKELMEERYSLTLLNPLGFNNTYTIATTKEIAEKYNVKKVSDLAKYNEEFVISPTMEFVNRDDGLNELSKLYGLKFKSIKAMDGSLRYSALKSGDCQFIDAFSTEGLLKAFDLQVLEDDKEFFPPYNAVPVIRMDTLEKYPELKEVLAVLDGKIDEEAMIDLNYKVDKLSKSPEEVAREFLVSEGLIE*