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NECEvent2014_8_4_scaffold_25_15

Organism: NECEvent2014_8_4_Clostridium_paraputrificum_31_73

near complete RP 50 / 55 BSCG 51 / 51 ASCG 15 / 38 MC: 2
Location: comp(21784..22749)

Top 3 Functional Annotations

Value Algorithm Source
tRNA-dihydrouridine synthase {ECO:0000256|PIRNR:PIRNR006621}; EC=1.-.-.- {ECO:0000256|PIRNR:PIRNR006621};; TaxID=1561 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostrid similarity UNIPROT
DB: UniProtKB
  • Identity: 80.3
  • Coverage: 319.0
  • Bit_score: 541
  • Evalue 6.90e-151
tRNA-dihydrouridine synthase n=1 Tax=Clostridium botulinum (strain Alaska E43 / Type E3) RepID=B2V534_CLOBA similarity UNIREF
DB: UNIREF100
  • Identity: 80.4
  • Coverage: 321.0
  • Bit_score: 542
  • Evalue 2.20e-151
  • rbh
dihydrouridine synthase family protein similarity KEGG
DB: KEGG
  • Identity: 80.4
  • Coverage: 321.0
  • Bit_score: 542
  • Evalue 6.20e-152

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Taxonomy

Clostridium baratii → Clostridium → Clostridiales → Clostridia → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 966
ATGAGATTTTATTTAGCCCCAATGGAGGGGATTACTGGATATATATATAGAAATGCTTATGAGAAGTTCTTTCACAATATTGATAAATACTTTACGCCATTTATTGTACCCAATAAAAGCAGAAGTCTTAAAACAAAAGAGTTAAGAGATATTTTACCTGAAAATAATGAAGGAATGAACATAGTTCCTCAAATACTTACAAATGATTTTGAGGGATTCATTGTTACTGCTAGAAAGTTACAGCAATTAGGATATAATGAGGTGAATTTAAATTTAGGATGTCCAGCAGGGACAGTTGTTTCAAAAAATAGAGGCTCAGGTTTTCTTGCATTAAGAGAGGAACTAGACAAATTTTTAGAAGAAATATACAAGATTGAAGATATGAAAATTTCAATAAAGACTAGAATTGGAAAGGATACTCCAGAGGAGTTTTATAAACTGATAGAGATATATAACAAATATCCTTTAGAAGAATTAATAATCCATCCAAGAACTAGGCAAGATTTTTATGGAAATAAGCCTAACTTAGAGATTTTTAAGGATGCACTATCATTAAGTAAAAGCCCTGTGTGTTATAATGGAGATATTTTTATAGTTGAAAATTATAATAAATTAGTTAATAGTTTTCCAGAAGTAGACAAAGTTATGCTTGGTAGAGGTGTTTTAGCTAATCCAGGTTTAATTGGAGATATTAAAGGTAATGATTTTATTACTAAAGATACATTAAAAGCCTTCCATGATGAAATTTTTAATAACTATATAGAACTTTTTAATGATGATAAAAATGCAATGTTTAGAATGAAAGAACTTTGGGGGTATATGATATATATGTTTACTGATAATAAGAAGTATGCAAAAAAGATAAAGAAAGCTCAAAAAGTTATAGATTATAAACAAGCTGTTTCAAGTTTATTTATGGAACAAGAGATTGTTAAAGGGGCTGGCTTGTTTAATAGTATATTTTAA
PROTEIN sequence
Length: 322
MRFYLAPMEGITGYIYRNAYEKFFHNIDKYFTPFIVPNKSRSLKTKELRDILPENNEGMNIVPQILTNDFEGFIVTARKLQQLGYNEVNLNLGCPAGTVVSKNRGSGFLALREELDKFLEEIYKIEDMKISIKTRIGKDTPEEFYKLIEIYNKYPLEELIIHPRTRQDFYGNKPNLEIFKDALSLSKSPVCYNGDIFIVENYNKLVNSFPEVDKVMLGRGVLANPGLIGDIKGNDFITKDTLKAFHDEIFNNYIELFNDDKNAMFRMKELWGYMIYMFTDNKKYAKKIKKAQKVIDYKQAVSSLFMEQEIVKGAGLFNSIF*