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NECEvent2014_8_4_scaffold_25_45

Organism: NECEvent2014_8_4_Clostridium_paraputrificum_31_73

near complete RP 50 / 55 BSCG 51 / 51 ASCG 15 / 38 MC: 2
Location: comp(57187..58491)

Top 3 Functional Annotations

Value Algorithm Source
PTS system, lactose/cellobiose family IIC subunit n=1 Tax=Clostridium beijerinckii (strain ATCC 51743 / NCIMB 8052) RepID=A6M2G1_CLOB8 similarity UNIREF
DB: UNIREF100
  • Identity: 61.8
  • Coverage: 434.0
  • Bit_score: 569
  • Evalue 3.00e-159
PTS system lactose/cellobiose family transporter subunit IIC similarity KEGG
DB: KEGG
  • Identity: 61.8
  • Coverage: 434.0
  • Bit_score: 569
  • Evalue 8.40e-160
Permease IIC component {ECO:0000256|PIRNR:PIRNR006351}; TaxID=290402 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium beijerinckii (strain A similarity UNIPROT
DB: UniProtKB
  • Identity: 61.8
  • Coverage: 434.0
  • Bit_score: 569
  • Evalue 4.20e-159

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Taxonomy

Clostridium beijerinckii → Clostridium → Clostridiales → Clostridia → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 1305
ATGAAAGAAAAAATAAATAATTTTATGAATGATACAATAATACCAAATATACTTAAGTTCGTTAATCTTAAAGGGATTGTAGCTTTAAAGGATGGAATATTATTTACATTACCATTATTAATGATAGGGTCTATATTTCTATTAATAGCTAATTTTCCATATCAACCATTTACAGATTTTATTAATAGCCATGGTTGGGCAGATCCATTAGCACAAATTAATGGTGCTACATTTAATATAATAGCATTAATAGCTGTTGTTGGTGTTGCATATTCTTATGTTAAGAATGAAGGATATGAGGCTTTATCAGCAGGGGTTATTGCATTTGCAGTTTTTCTAATTGTAACTAATTCATATGCTTTAAATGGAGATGGTGCAAAGGTTACTAATGTAATATCAAAGGATTGGACTAATGGACAAGGTATGATAACAGCTATAATCATTGGTTTAGTAGTTGGTGCTGTTTATTCTTGGTTTATGAAAAAAGGTATAAAGATAAAGATGCCTGAAGGAGTTCCAAGTGGTGTTGCTAACTCATTTGCGTCATTAATTCCAGGAGCTGTTTTAATTACAGGTGCAATGTTTGTTTATGTATTCTTTAAATTTGTGTTAGATACAACAATGGTAGAATTTATATATAAAATAATTCAAACACCATTACAAGGTATGACTGACTCAATAGGTGGAGTAATAGTGTATTGTTTAATTGCTACTATTTTATGGTGGTTCGGTGTTCATGGAGGAACTATAGTTACAGGAATTATGTTACCAATATTACTTTCAAATATTTCTGCAAACCAAGCAATTATAGATGGTGGTAATGCATTAACTATTGCTAATGGAGCTCATATTGTTACAGATCAATTTACATCTGCTTACATAAATCTTACAGGTACAGGTATTACTCTAGGTCTTGTATTATATATGGCATTCTTTGCAAAGTCAACACAATGTAAACAACTAGGTAAATTATCATTAGTACCAGGTTTATTCAATATAAATGAGCCAGTTATTTTTGGTACTCCAATAGTAATGAATCCATTCCTACTAGTACCATTCGTATTAACTCCAACTGTTGTAGGTATACTTTTATATTGTGCAGTTAGCTTTGGTTTAGTTCCACCATTTAGTGGTGTTGTTGTTCCTTGGACATGCCCTCCAATTATATCAGGATTCTTACTTGGTGGATGGAAAATGGCAGTAGCTCAAGTTGTAATATTATGTATCTCATTTGGAATCTACTTCCCATTCATAAGAAAAGTAGATTTAATGAATTTAGAAAACGAAAAATTAGCTAATAGATAG
PROTEIN sequence
Length: 435
MKEKINNFMNDTIIPNILKFVNLKGIVALKDGILFTLPLLMIGSIFLLIANFPYQPFTDFINSHGWADPLAQINGATFNIIALIAVVGVAYSYVKNEGYEALSAGVIAFAVFLIVTNSYALNGDGAKVTNVISKDWTNGQGMITAIIIGLVVGAVYSWFMKKGIKIKMPEGVPSGVANSFASLIPGAVLITGAMFVYVFFKFVLDTTMVEFIYKIIQTPLQGMTDSIGGVIVYCLIATILWWFGVHGGTIVTGIMLPILLSNISANQAIIDGGNALTIANGAHIVTDQFTSAYINLTGTGITLGLVLYMAFFAKSTQCKQLGKLSLVPGLFNINEPVIFGTPIVMNPFLLVPFVLTPTVVGILLYCAVSFGLVPPFSGVVVPWTCPPIISGFLLGGWKMAVAQVVILCISFGIYFPFIRKVDLMNLENEKLANR*