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NECEvent2014_8_4_scaffold_33_19

Organism: NECEvent2014_8_4_Clostridium_paraputrificum_31_73

near complete RP 50 / 55 BSCG 51 / 51 ASCG 15 / 38 MC: 2
Location: comp(24836..25597)

Top 3 Functional Annotations

Value Algorithm Source
Pseudouridine synthase {ECO:0000256|RuleBase:RU003887}; EC=5.4.99.- {ECO:0000256|RuleBase:RU003887};; TaxID=1415775 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridiu similarity UNIPROT
DB: UniProtKB
  • Identity: 81.2
  • Coverage: 250.0
  • Bit_score: 406
  • Evalue 2.70e-110
Pseudouridine synthase n=1 Tax=Clostridium celatum DSM 1785 RepID=L1QKX4_9CLOT similarity UNIREF
DB: UNIREF100
  • Identity: 78.0
  • Coverage: 254.0
  • Bit_score: 393
  • Evalue 2.20e-106
  • rbh
pseudouridine synthase family protein similarity KEGG
DB: KEGG
  • Identity: 81.2
  • Coverage: 250.0
  • Bit_score: 406
  • Evalue 5.50e-111

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Taxonomy

Clostridium baratii → Clostridium → Clostridiales → Clostridia → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 762
ATGAACAGAAATAATAATGTAATAGTACATAATGATAGAAAAGAAGAGATAAGATTAAATAAATACATAAGCGAGACTGGAATTTGCTCTAGAAGGGAAGCTGACAAGCTTATAGAAAATGGGAAGGTAACAATAGATGGAGTAAAGGCCACTATGGGTATGAAGGTAGGAAAAGGGCAAATAGTTAAAGTAAATGGGAAAGATATAACGAAGGAAGAAGAACTTGTCTATATAGCATTAAATAAACCAGTAGGTATAACTTGTACAACTGAGCATAAAGTAAAAGGAAATATTGTTGATTTCGTTGGGCATAAAAAAAGAATATTTCCTATAGGAAGATTAGATAAAGATTCCCAAGGATTAATTTTATTAACTAATGATGGAGATATAGTTAATAAAATTTTACGTGCAGGAAATAATCACGAAAAGGAATATATGGTAACTGTTAATAAGGCAATTACTGATGATTTTATTAAGAAGATGTCATCTGGGGTTAGAATTCTAGGTACTGTTACGAAGAAATGTTTTGTTAAAAAAGAGGGAAGCAAGGTATTTAGAATAATATTAACTGAAGGAATGAATAGGCAAATAAGAAGAATGTGTGAAGTCTTTGGGTATAAAGTAGTTAAACTTGAAAGAGTTAGAATAATGAATATTCATTTAGGAAATTTAAAGAATGGTAATTGGAGAGATTTAACTATAAAAGAGTTAGAAGGTATAAATGATCTTATAAAAGATTCTCAAAAGGTTTATAAAGAATAG
PROTEIN sequence
Length: 254
MNRNNNVIVHNDRKEEIRLNKYISETGICSRREADKLIENGKVTIDGVKATMGMKVGKGQIVKVNGKDITKEEELVYIALNKPVGITCTTEHKVKGNIVDFVGHKKRIFPIGRLDKDSQGLILLTNDGDIVNKILRAGNNHEKEYMVTVNKAITDDFIKKMSSGVRILGTVTKKCFVKKEGSKVFRIILTEGMNRQIRRMCEVFGYKVVKLERVRIMNIHLGNLKNGNWRDLTIKELEGINDLIKDSQKVYKE*