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NECEvent2014_8_4_scaffold_152_6

Organism: NECEvent2014_8_4_Clostridium_paraputrificum_31_73

near complete RP 50 / 55 BSCG 51 / 51 ASCG 15 / 38 MC: 2
Location: comp(4689..5489)

Top 3 Functional Annotations

Value Algorithm Source
Helix-turn-helix domain, rpiR family protein n=1 Tax=Clostridium bifermentans ATCC 19299 RepID=T4VD16_CLOBI similarity UNIREF
DB: UNIREF100
  • Identity: 89.1
  • Coverage: 266.0
  • Bit_score: 465
  • Evalue 3.70e-128
  • rbh
Helix-turn-helix domain, rpiR family protein {ECO:0000313|EMBL:EQK38626.1}; TaxID=1233170 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="[ similarity UNIPROT
DB: UniProtKB
  • Identity: 88.7
  • Coverage: 266.0
  • Bit_score: 464
  • Evalue 1.20e-127
RpiR family phosphosugar-binding transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 54.9
  • Coverage: 266.0
  • Bit_score: 285
  • Evalue 1.50e-74

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Taxonomy

[Clostridium] bifermentans → Peptoclostridium → Clostridiales → Clostridia → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 801
TTGAACATTATATGCGAGATACAACAAAAATATAATAATTTTTCAGATAAAGAAAAAGCTATTGCTGATTATATCTTAAATCAACCTGATATGATTAAAAATATAAATATAACAGAATTAGCTAAAATAATAGGCACTTCTGGTGCTACTATTACTAGATTTTCTAAAAAAATTGGCTGCGATAGCTTTGTTGAAATGAAAATGCAGATTAATTTAAGTACTAATGATAGCGAATCTATTGATAGTGATGATATTTTTTCAAGTGTCTATAGTCATTACAATGAAGTAATTGAAAGAACAAATTCAATTATAGATAAATCCGCTATATTTAATATAGTTGAAGAAATAAAAAAGGCTAATAAAATATATCTTTATGGAGTTGGTAGTTCTGGTTTAACAGCTACTGAAATGATGCAAAGATTAATAAGAATGGGATTTAATATACATTGTATCTCAGACTCTCATATGATGATTATTAATAGTTCAATAGCATCCTCAGAAGACCTTGTTATAGGATTATCTATATCAGGTGAAACAAAAGAGGTTGTAAATGCTTTAAAGGTTTCTAAGAGAAATGGTGCTAAAACTGCTTGTATAACAAGCTTTGATGAAAGTTCAGTAACAGTCTATTCGGATATAATATTAAAAGTTTATAATACTCGTTTCATAGGTAGACATAAGTTTATAAACTCTCAGTTTTCTACTATGTATCTTTTAGATTTAATATCTACTGTATTATTAGAAGATAAAAACTTAGAAGAAAAAATGCAAATAACTATAGATGCAATAATTAATTCATAA
PROTEIN sequence
Length: 267
LNIICEIQQKYNNFSDKEKAIADYILNQPDMIKNINITELAKIIGTSGATITRFSKKIGCDSFVEMKMQINLSTNDSESIDSDDIFSSVYSHYNEVIERTNSIIDKSAIFNIVEEIKKANKIYLYGVGSSGLTATEMMQRLIRMGFNIHCISDSHMMIINSSIASSEDLVIGLSISGETKEVVNALKVSKRNGAKTACITSFDESSVTVYSDIILKVYNTRFIGRHKFINSQFSTMYLLDLISTVLLEDKNLEEKMQITIDAIINS*