ggKbase home page

NECEvent2014_8_4_scaffold_261_6

Organism: NECEvent2014_8_4_Clostridium_paraputrificum_31_73

near complete RP 50 / 55 BSCG 51 / 51 ASCG 15 / 38 MC: 2
Location: 2456..3238

Top 3 Functional Annotations

Value Algorithm Source
Phage regulatory protein, Rha family n=1 Tax=Clostridium symbiosum ATCC 14940 RepID=U2C6M7_CLOSY similarity UNIREF
DB: UNIREF100
  • Identity: 42.0
  • Coverage: 245.0
  • Bit_score: 183
  • Evalue 2.10e-43
Phage regulatory protein, Rha family {ECO:0000313|EMBL:ERI79678.1}; TaxID=411472 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] symbiosum ATCC 14940 similarity UNIPROT
DB: UniProtKB
  • Identity: 42.0
  • Coverage: 245.0
  • Bit_score: 183
  • Evalue 3.00e-43
prophage antirepressor similarity KEGG
DB: KEGG
  • Identity: 51.5
  • Coverage: 132.0
  • Bit_score: 139
  • Evalue 1.70e-30

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

[Clostridium] symbiosum → Lachnoclostridium → Clostridiales → Clostridia → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 783
ATGGAAAATTTAAAACACAAACATAGAGAAGGGATAACAGTTGGTTATAGGGATAATAAATTAGTAACAATAGACAGTAGAGAAGTTGCTGAAATGTTAGGGAAAGAACATTCTTACGTATTAGAAATGATACAAGGAAGAGAAGGAAAACTAGGAGTAATACCAGTTTTGGAAAACGCCAATTTGGCGGTATCAAATTATTTCATACCTTCAACTTATAAAGCTGGTACTAGAGAATACAAATGTTACTTAGTTACTAAAATGGGATGTGAGTTATTAGGTAATAAGCAGCAAGGAGAAAAAGGAATATTATTTACTGCCAAGTATGTAGAAAGATTTAATCAAATGGAGCAAGAACTAAAAGGACAAATATTAAATAAATCTAAATCAGACAATTCAATTAAAGAAAAAGAAATTGAAGCAAGATTGAAAAATGCTAGAGCAAGAGAAGCAAATATATTACTTAAGATATCTAATAATCCTAATTTATCTAAAGAATATGTACAAGTCCTACAAAGTAAGGCTACAGAGATAGTTACAGGAGAAAAGTTATTGCCATTACCAGTAGCAGAAAGAAAAACTTACTCAGCTACAGAGATTGGAAATGAGTTAGGTATAACTTCTACTAAGGTTGGGATTCTTGCTAATAAGTATAATTTAAAAACTGAAGAATACGGGAAGCTATTTCATGATAAATCTAGATATTCAAGTAAAGAAGTTGAGAGCTTTAGGTATTACGATAATGTAATTCCAGTATTAGCTGAAATATTATCAAAAGCTTAG
PROTEIN sequence
Length: 261
MENLKHKHREGITVGYRDNKLVTIDSREVAEMLGKEHSYVLEMIQGREGKLGVIPVLENANLAVSNYFIPSTYKAGTREYKCYLVTKMGCELLGNKQQGEKGILFTAKYVERFNQMEQELKGQILNKSKSDNSIKEKEIEARLKNARAREANILLKISNNPNLSKEYVQVLQSKATEIVTGEKLLPLPVAERKTYSATEIGNELGITSTKVGILANKYNLKTEEYGKLFHDKSRYSSKEVESFRYYDNVIPVLAEILSKA*