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NECEvent2014_8_4_scaffold_645_5

Organism: NECEvent2014_8_4_Clostridium_paraputrificum_31_73

near complete RP 50 / 55 BSCG 51 / 51 ASCG 15 / 38 MC: 2
Location: 4223..5257

Top 3 Functional Annotations

Value Algorithm Source
Putative ABC-type sugar transport system,periplasmic component n=1 Tax=Clostridium chauvoei JF4335 RepID=S6FMU0_9CLOT similarity UNIREF
DB: UNIREF100
  • Identity: 76.7
  • Coverage: 348.0
  • Bit_score: 522
  • Evalue 3.30e-145
  • rbh
Sugar ABC transporter substrate-binding protein {ECO:0000313|EMBL:KJU72037.1}; TaxID=1561 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium b similarity UNIPROT
DB: UniProtKB
  • Identity: 78.2
  • Coverage: 348.0
  • Bit_score: 541
  • Evalue 7.40e-151
periplasmic binding s and sugar binding domain of LacI family protein similarity KEGG
DB: KEGG
  • Identity: 77.6
  • Coverage: 348.0
  • Bit_score: 534
  • Evalue 2.40e-149

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Taxonomy

Clostridium baratii → Clostridium → Clostridiales → Clostridia → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 1035
ATGAGAAAGATTAAAAAATTACTTGCTATGGCTACAGCAACTTTAATGATTGGTGGCTTATTCGTTGGATGTGGAGGTAAAGATGGCGGAAGTACAGCATCTGGCGATCCAGTAAAGGTAGGAGTATTCCTATACAAGTTCGATGATACTTATATTTCAACAGTACGTCAAAGCTTACAAGAAATTCAAAAACAAAATGAAGGTAAGGTTGAATTTGAATTTATCGATGGTAAGGGTGACCAATCAATACAAAACGATACTATAGATACAATACTACAAAAAGATATTGATTTGTTAATGGTAAACCTTGTTGATATAGGTGCAGCACCAACTGTACTTAATAAAATAAAGGATGCTGGCAAACCGGTTGTATTCTTTAACAGAGAACCAGCAGCAGATGTAGTAAAATCTTATGACAAAGCTATGTTTGTAGGAACTAATGCGCAAGAAGCTGGTGTTTTACAAGGTAAAATTCTTGCAGATCAATGGAAAGCTAATCCGGCATTAGATAAGAATGGTGATGGGGTTATGCAATATGTAATGCTTAAGGGTGAACCTGATAATGCAGAAGCTGTTGCAAGAACTAAGTTCTCTGTATCTACTATAAATGATGCTGGAATTAAGACAGAGGAATTAGCAAATCAAGTTTGTAACTGGCAACAAGATTTAGCTCAAACTAACATGGAAGCATGGTTATCAAGATATGGTAACGGAATTGAAGTAGTTATTTCTAATAATGATGGAATGGCTCAAGGTGCAATAGCAGCTCTTCAAGCAGCTGGATATAACAATGGTGACGCAGCTAAGACTATTCCTGTTGTAGGTGTTGATGCAACAGCAGCTGCTCAAGATTTAATATCTAAAGGATTTATGACAGGTTCTGTTCTTCAAGATGCTCCAGCTATGGCAAAAGCTCTTTATGAATGTGGTATGAATTTAGCATCTGGTAAGAGTGCTACAGAAGGTACTGACTATAAGTTTGATGATACAGGTGTAGCAGTTCGTATTCCTTATCAAGAATATACTAAGAAATAG
PROTEIN sequence
Length: 345
MRKIKKLLAMATATLMIGGLFVGCGGKDGGSTASGDPVKVGVFLYKFDDTYISTVRQSLQEIQKQNEGKVEFEFIDGKGDQSIQNDTIDTILQKDIDLLMVNLVDIGAAPTVLNKIKDAGKPVVFFNREPAADVVKSYDKAMFVGTNAQEAGVLQGKILADQWKANPALDKNGDGVMQYVMLKGEPDNAEAVARTKFSVSTINDAGIKTEELANQVCNWQQDLAQTNMEAWLSRYGNGIEVVISNNDGMAQGAIAALQAAGYNNGDAAKTIPVVGVDATAAAQDLISKGFMTGSVLQDAPAMAKALYECGMNLASGKSATEGTDYKFDDTGVAVRIPYQEYTKK*