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NECEvent2014_8_4_scaffold_3037_3

Organism: NECEvent2014_8_4_Clostridium_paraputrificum_31_73

near complete RP 50 / 55 BSCG 51 / 51 ASCG 15 / 38 MC: 2
Location: 1123..1770

Top 3 Functional Annotations

Value Algorithm Source
sigH; RNA polymerase factor sigma-70 (EC:2.7.7.6) similarity KEGG
DB: KEGG
  • Identity: 100.0
  • Coverage: 215.0
  • Bit_score: 420
  • Evalue 3.10e-115
RNA polymerase factor sigma-70 {ECO:0000313|EMBL:EIA15935.1}; EC=2.7.7.6 {ECO:0000313|EMBL:EIA15935.1};; TaxID=883064 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostrid similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 215.0
  • Bit_score: 420
  • Evalue 1.60e-114
RNA polymerase factor sigma-70 n=5 Tax=Clostridium perfringens RepID=H7CZC7_CLOPF similarity UNIREF
DB: UNIREF100
  • Identity: 100.0
  • Coverage: 215.0
  • Bit_score: 420
  • Evalue 1.10e-114
  • rbh

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Taxonomy

Clostridium perfringens → Clostridium → Clostridiales → Clostridia → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 648
ATGGGGATTACTTATGATTTGGCTAAAATCAATAATTATGAAGAATTTAAAGATTTAACAGATAAAGAAGTAGTTATGCTAGCTAAAAACGGTGATAATATGGCTCAAGAATATGTAATAAGTAAGTATGAGCAGTTTGTAAAAGCTAAATCTAAATCATATTTTCTTATAGGAGCAGATAAAGAAGATATATATCAAGAGGGAATGATTGGATTATATAAAGCAATAAGAGATTTTAATCCAGATAAGTTTGCATCATTTAAAAGTTTTGCAGAACTTTGTGTTACAAGGCAGATAATAACTGCTATAAAAACTGCAACAAGGCAAAAACATATCCCATTAAACACTTATATTTCTTTAAGCAAACCTATTTACGAGGAAGAATCTGATAGAACGCTTTTAGATACTGTAGTAGGAATAACAATTACAGATCCTGAATCATTGGTCATAGGTAAAGAAGAGGTTGAAAAAATAGAAAGTGCAATTAATAGTGTGCTTTCTGAACTAGAATTAGAGGTGTTAAATTCTTATTTAGATGGTAAATCATATCAAGAAATTGCCTGTGATTTAGATAGAGAAGCTAAATCTATAGATAATGCATTACAACGTGTAAAAAGAAAGCTTGAAAAATGTTTAAACATTAAATAA
PROTEIN sequence
Length: 216
MGITYDLAKINNYEEFKDLTDKEVVMLAKNGDNMAQEYVISKYEQFVKAKSKSYFLIGADKEDIYQEGMIGLYKAIRDFNPDKFASFKSFAELCVTRQIITAIKTATRQKHIPLNTYISLSKPIYEEESDRTLLDTVVGITITDPESLVIGKEEVEKIESAINSVLSELELEVLNSYLDGKSYQEIACDLDREAKSIDNALQRVKRKLEKCLNIK*