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NECEvent2014_8_4_Streptococcus_HSISS3-rel_41_5

NECEvent2014_8_4_Streptococcus_41_5
In projects: NECEvent2014_8_4

Consensus taxonomy: Streptococcus  →  Lactobacillales  →  Bacilli  →  Firmicutes  →  Bacteria

Description

May include other low abundance Strep.

Displaying items 101-150 of 676 in total
contig # features sequence size GC content (%) Cov Coding Density (%)
NECEvent2014_8_4_scaffold_5502 178_004_scaffold_5502
Species: Streptococcus salivarius (100%)
1 1049 bp 34.03 5.15 99.81
NECEvent2014_8_4_scaffold_5636 178_004_scaffold_5636
Species: Streptococcus sp. HSISS3 (100%)
1 1019 bp 38.86 5.15 99.80
NECEvent2014_8_4_scaffold_4050 178_004_scaffold_4050
Species: Streptococcus mitis (100%)
1 1518 bp 47.30 4.94 99.80
NECEvent2014_8_4_scaffold_3125 178_004_scaffold_3125
Species: Streptococcus mitis (100%)
1 2008 bp 34.96 4.48 99.80
NECEvent2014_8_4_scaffold_4165 178_004_scaffold_4165
Species: Streptococcus salivarius (100%)
2 1464 bp 35.38 4.71 99.80
NECEvent2014_8_4_scaffold_4196 178_004_scaffold_4196
Species: Streptococcus sp. SR4 (100%)
1 1449 bp 46.38 6.83 99.79
NECEvent2014_8_4_scaffold_4202 178_004_scaffold_4202
Species: Streptococcus sp. HSISS3 (100%)
1 1446 bp 41.29 4.46 99.79
NECEvent2014_8_4_scaffold_4276 178_004_scaffold_4276
Species: Streptococcus pneumoniae (100%)
1 1416 bp 44.35 5.72 99.79
NECEvent2014_8_4_scaffold_4298 178_004_scaffold_4298
Species: Streptococcus mitis (100%)
1 1407 bp 39.73 2.77 99.79
NECEvent2014_8_4_scaffold_3475 178_004_scaffold_3475
Species: Streptococcus sp. ACS2 (50%)
2 1783 bp 39.15 4.88 99.78
NECEvent2014_8_4_scaffold_4538 178_004_scaffold_4538
Species: Streptococcus sp. C150 (100%)
1 1317 bp 42.60 5.35 99.77
NECEvent2014_8_4_scaffold_4620 178_004_scaffold_4620
Species: Streptococcus salivarius (100%)
1 1290 bp 38.91 5.00 99.77
NECEvent2014_8_4_scaffold_4621 178_004_scaffold_4621
Species: Streptococcus sp. C150 (100%)
1 1290 bp 38.99 3.95 99.77
NECEvent2014_8_4_scaffold_4744 178_004_scaffold_4744
Species: Streptococcus sp. HSISS3 (100%)
1 1257 bp 44.39 3.94 99.76
NECEvent2014_8_4_scaffold_4746 178_004_scaffold_4746
Species: Streptococcus sp. M334 (100%)
1 1257 bp 46.86 3.70 99.76
NECEvent2014_8_4_scaffold_4794 178_004_scaffold_4794
Species: Streptococcus mitis (50%)
2 1242 bp 44.12 4.83 99.76
NECEvent2014_8_4_scaffold_4832 178_004_scaffold_4832
Species: Streptococcus sp. HSISS2 (100%)
1 1227 bp 32.27 3.91 99.76
NECEvent2014_8_4_scaffold_5122 178_004_scaffold_5122
Species: Streptococcus sp. HSISS2 (100%)
2 1143 bp 41.91 3.67 99.74
NECEvent2014_8_4_scaffold_5167 178_004_scaffold_5167
Species: Streptococcus salivarius (100%)
1 1131 bp 42.97 5.31 99.73
NECEvent2014_8_4_scaffold_4162 178_004_scaffold_4162
Species: Streptococcus sp. C150 (100%)
1 1465 bp 38.91 6.96 99.73
NECEvent2014_8_4_scaffold_5311 178_004_scaffold_5311
Species: Streptococcus sp. C150 (100%)
1 1092 bp 39.84 5.63 99.73
NECEvent2014_8_4_scaffold_5330 178_004_scaffold_5330
Species: Streptococcus oralis (100%)
2 1086 bp 42.08 4.83 99.72
NECEvent2014_8_4_scaffold_5404 178_004_scaffold_5404
Species: Streptococcus sp. oral taxon 071 (100%)
1 1071 bp 37.54 3.64 99.72
NECEvent2014_8_4_scaffold_5448 178_004_scaffold_5448
Species: Streptococcus sp. HSISS3 (100%)
1 1059 bp 44.19 3.97 99.72
NECEvent2014_8_4_scaffold_4305 178_004_scaffold_4305
Species: Streptococcus sp. C150 (100%)
1 1405 bp 42.21 4.06 99.72
NECEvent2014_8_4_scaffold_4332 178_004_scaffold_4332
Species: Streptococcus sp. C150 (100%)
1 1396 bp 42.41 6.55 99.71
NECEvent2014_8_4_scaffold_4374 178_004_scaffold_4374
Species: Streptococcus sp. HSISS3 (100%)
1 1378 bp 35.63 4.14 99.71
NECEvent2014_8_4_scaffold_5603 178_004_scaffold_5603
Species: Streptococcus salivarius (50%)
2 1029 bp 41.89 3.21 99.71
NECEvent2014_8_4_scaffold_4578 178_004_scaffold_4578
Species: Streptococcus pneumoniae (66.67%)
3 1303 bp 41.98 4.37 99.69
NECEvent2014_8_4_scaffold_4618 178_004_scaffold_4618
Species: Streptococcus vestibularis (100%)
1 1291 bp 41.44 11.39 99.69
NECEvent2014_8_4_scaffold_4706 178_004_scaffold_4706
Species: Streptococcus sp. HSISS3 (50%)
2 1267 bp 41.04 4.74 99.68
NECEvent2014_8_4_scaffold_4725 178_004_scaffold_4725
Species: Streptococcus salivarius (100%)
1 1261 bp 46.71 4.04 99.68
NECEvent2014_8_4_scaffold_4748 178_004_scaffold_4748
Species: Streptococcus mitis (50%)
2 1255 bp 45.98 4.78 99.68
NECEvent2014_8_4_scaffold_5135 178_004_scaffold_5135
Species: Streptococcus sp. HSISS2 (100%)
1 1141 bp 34.62 3.94 99.65
NECEvent2014_8_4_scaffold_5475 178_004_scaffold_5475
Species: Streptococcus oralis (100%)
1 1054 bp 34.35 3.98 99.62
NECEvent2014_8_4_scaffold_5653 178_004_scaffold_5653
Species: Streptococcus salivarius (100%)
1 1015 bp 40.79 4.14 99.61
NECEvent2014_8_4_scaffold_5676 178_004_scaffold_5676
Species: Streptococcus mitis (50%)
2 1009 bp 37.86 4.16 99.60
NECEvent2014_8_4_scaffold_2171 178_004_scaffold_2171
Species: Streptococcus sp. SR4 (50%)
2 3012 bp 42.73 7.47 99.60
NECEvent2014_8_4_scaffold_4243 178_004_scaffold_4243
Genus: Streptococcus (100%)
3 1431 bp 42.77 5.03 99.58
NECEvent2014_8_4_scaffold_4595 178_004_scaffold_4595
Species: Streptococcus salivarius CAG:79 (50%)
2 1299 bp 43.42 4.39 99.54
NECEvent2014_8_4_scaffold_2656 178_004_scaffold_2656
Species: Streptococcus mitis (50%)
2 2464 bp 39.81 4.87 99.47
NECEvent2014_8_4_scaffold_2991 178_004_scaffold_2991
Species: Streptococcus sp. HSISS3 (100%)
1 2121 bp 43.42 5.52 99.43
NECEvent2014_8_4_scaffold_2279 178_004_scaffold_2279
Species: Streptococcus sp. HSISS3 (50%)
2 2882 bp 44.34 4.53 99.41
NECEvent2014_8_4_scaffold_3740 178_004_scaffold_3740
Species: Streptococcus mitis (50%)
2 1661 bp 42.38 5.51 99.34
NECEvent2014_8_4_scaffold_2432 178_004_scaffold_2432
Species: Streptococcus sanguinis (50%)
2 2704 bp 35.32 3.88 99.30
NECEvent2014_8_4_scaffold_1495 178_004_scaffold_1495
Genus: Streptococcus (100%)
6 4229 bp 42.85 5.46 99.24
NECEvent2014_8_4_scaffold_1743 178_004_scaffold_1743
Species: Streptococcus sp. HSISS2 (50%)
4 3682 bp 43.02 6.36 99.24
NECEvent2014_8_4_scaffold_5123 178_004_scaffold_5123
Species: Streptococcus sp. C150 (100%)
2 1143 bp 36.57 3.81 99.21
NECEvent2014_8_4_scaffold_4494 178_004_scaffold_4494
Species: Streptococcus sp. HSISS2 (50%)
2 1334 bp 33.51 4.05 99.18
NECEvent2014_8_4_scaffold_4191 178_004_scaffold_4191
Species: Streptococcus mitis (50%)
2 1452 bp 43.32 4.13 99.17
Displaying items 101-150 of 676 in total

Ribosomal proteins shown here were identified using keyword searches of all annotations.

The SCGs are found by conducting USEARCH with a custom database.

The SCGs are found by conducting USEARCH with a custom database.