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NECEvent2014_8_4_Streptococcus_HSISS3-rel_41_5

NECEvent2014_8_4_Streptococcus_41_5
In projects: NECEvent2014_8_4

Consensus taxonomy: Streptococcus  →  Lactobacillales  →  Bacilli  →  Firmicutes  →  Bacteria

Description

May include other low abundance Strep.

Displaying items 201-250 of 676 in total
contig # features sequence size GC content (%) Cov Coding Density (%)
NECEvent2014_8_4_scaffold_2898 178_004_scaffold_2898
Species: Streptococcus salivarius CAG:79 (50%)
2 2204 bp 36.89 4.36 87.93
NECEvent2014_8_4_scaffold_3176 178_004_scaffold_3176
Species: Streptococcus mitis (50%)
2 1974 bp 40.43 4.10 87.99
NECEvent2014_8_4_scaffold_4407 178_004_scaffold_4407
Species: Streptococcus sp. C150 (50%)
2 1367 bp 39.43 7.46 88.00
NECEvent2014_8_4_scaffold_2196 178_004_scaffold_2196
Species: Streptococcus sp. HSISS3 (66.67%)
3 2984 bp 39.68 5.78 88.07
NECEvent2014_8_4_scaffold_4689 178_004_scaffold_4689
Species: Streptococcus sp. HSISS3 (66.67%)
3 1270 bp 34.41 3.07 88.11
NECEvent2014_8_4_scaffold_5666 178_004_scaffold_5666
Species: Streptococcus mitis (50%)
2 1010 bp 32.08 4.90 88.22
NECEvent2014_8_4_scaffold_2637 178_004_scaffold_2637
Species: Streptococcus salivarius (75%)
4 2479 bp 41.59 5.75 88.34
NECEvent2014_8_4_scaffold_5101 178_004_scaffold_5101
Species: Streptococcus salivarius (50%)
2 1151 bp 32.32 4.69 88.36
NECEvent2014_8_4_scaffold_4088 178_004_scaffold_4088
Species: Streptococcus sp. HSISS3 (100%)
1 1497 bp 44.76 4.31 88.38
NECEvent2014_8_4_scaffold_5596 178_004_scaffold_5596
Species: Streptococcus oralis (100%)
1 1030 bp 35.92 3.20 88.54
NECEvent2014_8_4_scaffold_3124 178_004_scaffold_3124
Species: Streptococcus salivarius (50%)
2 2009 bp 39.62 3.88 88.55
NECEvent2014_8_4_scaffold_1569 178_004_scaffold_1569
Species: Streptococcus sp. HSISS3 (50%)
4 4067 bp 40.52 4.72 88.59
NECEvent2014_8_4_scaffold_2351 178_004_scaffold_2351
Species: Streptococcus sp. C150 (50%)
4 2803 bp 38.24 6.64 88.62
NECEvent2014_8_4_scaffold_5689 178_004_scaffold_5689
Species: Streptococcus mitis (50%)
2 1005 bp 43.38 5.07 88.66
NECEvent2014_8_4_scaffold_3596 178_004_scaffold_3596
Species: Streptococcus sp. M334 (50%)
2 1729 bp 36.26 4.86 88.66
NECEvent2014_8_4_scaffold_4379 178_004_scaffold_4379
Species: Streptococcus sp. C150 (66.67%)
3 1377 bp 39.94 4.14 88.67
NECEvent2014_8_4_scaffold_4429 178_004_scaffold_4429
Species: Streptococcus sp. C150 (50%)
2 1359 bp 40.47 6.62 88.74
NECEvent2014_8_4_scaffold_2376 178_004_scaffold_2376
Species: Streptococcus sp. HSISS3 (100%)
3 2770 bp 42.49 5.74 88.81
NECEvent2014_8_4_scaffold_1580 178_004_scaffold_1580
Species: Streptococcus salivarius (66.67%)
6 4026 bp 41.58 4.62 88.82
NECEvent2014_8_4_scaffold_3688 178_004_scaffold_3688
Species: Streptococcus sp. M334 (50%)
2 1684 bp 36.94 3.92 88.84
NECEvent2014_8_4_scaffold_3728 178_004_scaffold_3728
Species: Streptococcus sp. C150 (50%)
2 1664 bp 38.82 8.11 88.88
NECEvent2014_8_4_scaffold_3345 178_004_scaffold_3345
Species: Streptococcus sp. C150 (50%)
2 1866 bp 36.39 4.82 88.91
NECEvent2014_8_4_scaffold_4197 178_004_scaffold_4197
Species: Streptococcus pneumoniae (100%)
1 1449 bp 43.20 4.76 89.03
NECEvent2014_8_4_scaffold_1541 178_004_scaffold_1541
Species: Streptococcus sp. HSISS3 (50%)
2 4113 bp 38.63 4.08 89.06
NECEvent2014_8_4_scaffold_1275 178_004_scaffold_1275
Genus: Streptococcus (87.5%)
8 4945 bp 40.77 5.52 89.06
NECEvent2014_8_4_scaffold_4386 178_004_scaffold_4386
Species: Streptococcus mitis (50%)
2 1374 bp 37.85 7.64 89.08
NECEvent2014_8_4_scaffold_1123 178_004_scaffold_1123
Species: Streptococcus sp. HSISS3 (66.67%)
6 5701 bp 40.31 4.55 89.09
NECEvent2014_8_4_scaffold_5553 178_004_scaffold_5553
Species: Streptococcus mitis (100%)
2 1037 bp 42.82 3.47 89.10
NECEvent2014_8_4_scaffold_2827 178_004_scaffold_2827
Species: Streptococcus salivarius (50%)
2 2278 bp 40.08 4.61 89.16
NECEvent2014_8_4_scaffold_4033 178_004_scaffold_4033
Species: Streptococcus mitis (100%)
2 1524 bp 42.98 6.00 89.17
NECEvent2014_8_4_scaffold_4566 178_004_scaffold_4566
Species: Streptococcus mitis (50%)
4 1308 bp 38.69 3.90 89.22
NECEvent2014_8_4_scaffold_1420 178_004_scaffold_1420
Genus: Streptococcus (83.33%)
6 4435 bp 37.50 4.19 89.29
NECEvent2014_8_4_scaffold_3595 178_004_scaffold_3595
Species: Streptococcus thermophilus (100%)
1 1730 bp 35.95 5.55 89.31
NECEvent2014_8_4_scaffold_4871 178_004_scaffold_4871
Species: Streptococcus sp. C150 (66.67%)
3 1216 bp 41.94 3.95 89.31
NECEvent2014_8_4_scaffold_2894 178_004_scaffold_2894
Species: Streptococcus sp. HSISS2 (66.67%)
3 2210 bp 41.95 3.53 89.32
NECEvent2014_8_4_scaffold_3852 178_004_scaffold_3852
Species: Streptococcus pneumoniae (66.67%)
3 1602 bp 40.76 3.65 89.33
NECEvent2014_8_4_scaffold_5369 178_004_scaffold_5369
Species: Streptococcus infantis (50%)
2 1078 bp 42.86 5.84 89.33
NECEvent2014_8_4_scaffold_1299 178_004_scaffold_1299
Genus: Streptococcus (100%)
5 4891 bp 36.62 5.21 89.37
NECEvent2014_8_4_scaffold_2698 178_004_scaffold_2698
Species: Streptococcus sp. C150 (100%)
4 2413 bp 41.28 5.41 89.39
NECEvent2014_8_4_scaffold_4401 178_004_scaffold_4401
Species: Streptococcus sp. HSISS3 (50%)
2 1369 bp 38.71 3.51 89.41
NECEvent2014_8_4_scaffold_4293 178_004_scaffold_4293
Species: Streptococcus sp. HSISS3 (50%)
2 1409 bp 39.67 5.11 89.43
NECEvent2014_8_4_scaffold_2269 178_004_scaffold_2269
Species: Streptococcus mitis (50%)
2 2889 bp 40.95 4.05 89.51
NECEvent2014_8_4_scaffold_1957 178_004_scaffold_1957
Species: Streptococcus sp. HSISS3 (50%)
2 3317 bp 41.06 7.91 89.54
NECEvent2014_8_4_scaffold_3011 178_004_scaffold_3011
Species: Streptococcus mitis (50%)
2 2104 bp 41.68 4.92 89.54
NECEvent2014_8_4_scaffold_2025 178_004_scaffold_2025
Species: Streptococcus salivarius (50%)
2 3209 bp 41.51 5.42 89.56
NECEvent2014_8_4_scaffold_2646 178_004_scaffold_2646
Species: Streptococcus sp. HSISS3 (100%)
3 2472 bp 42.52 4.98 89.56
NECEvent2014_8_4_scaffold_2721 178_004_scaffold_2721
Species: Streptococcus mitis (66.67%)
3 2391 bp 44.37 5.96 89.59
NECEvent2014_8_4_scaffold_5292 178_004_scaffold_5292
Species: Streptococcus pneumoniae (100%)
2 1098 bp 41.26 3.28 89.62
NECEvent2014_8_4_scaffold_4179 178_004_scaffold_4179
Species: Streptococcus sp. HSISS2 (66.67%)
3 1456 bp 37.50 4.74 89.63
NECEvent2014_8_4_scaffold_4206 178_004_scaffold_4206
Species: Streptococcus sp. HSISS2 (100%)
1 1445 bp 44.78 2.70 89.69
Displaying items 201-250 of 676 in total

Ribosomal proteins shown here were identified using keyword searches of all annotations.

The SCGs are found by conducting USEARCH with a custom database.

The SCGs are found by conducting USEARCH with a custom database.