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NECEvent2014_8_4_Streptococcus_HSISS3-rel_41_5

NECEvent2014_8_4_Streptococcus_41_5
In projects: NECEvent2014_8_4

Consensus taxonomy: Streptococcus  →  Lactobacillales  →  Bacilli  →  Firmicutes  →  Bacteria

Description

May include other low abundance Strep.

Displaying items 401-450 of 676 in total
contig # features sequence size GC content (%) Cov Coding Density (%)
NECEvent2014_8_4_scaffold_2055 178_004_scaffold_2055
Species: Streptococcus sp. HSISS2 (50%)
4 3165 bp 40.92 5.83 95.26
NECEvent2014_8_4_scaffold_1564 178_004_scaffold_1564
Genus: Streptococcus (100%)
4 4073 bp 41.15 5.27 95.31
NECEvent2014_8_4_scaffold_4143 178_004_scaffold_4143
Species: Streptococcus sp. HSISS3 (66.67%)
3 1473 bp 40.87 5.30 95.32
NECEvent2014_8_4_scaffold_4397 178_004_scaffold_4397
Species: Streptococcus mitis (66.67%)
3 1372 bp 40.82 3.72 95.34
NECEvent2014_8_4_scaffold_5347 178_004_scaffold_5347
Species: Streptococcus sp. HSISS3 (66.67%)
3 1082 bp 39.93 3.88 95.38
NECEvent2014_8_4_scaffold_2738 178_004_scaffold_2738
Species: Streptococcus vestibularis (50%)
4 2371 bp 42.43 4.81 95.40
NECEvent2014_8_4_scaffold_3108 178_004_scaffold_3108
Species: Streptococcus sp. C150 (100%)
2 2018 bp 42.22 4.76 95.44
NECEvent2014_8_4_scaffold_4812 178_004_scaffold_4812
Species: Streptococcus sp. HSISS3 (50%)
2 1235 bp 42.83 5.10 95.47
NECEvent2014_8_4_scaffold_2952 178_004_scaffold_2952
Species: Streptococcus sp. HSISS3 (100%)
2 2154 bp 40.44 4.25 95.54
NECEvent2014_8_4_scaffold_4876 178_004_scaffold_4876
Species: Streptococcus sp. HSISS2 (100%)
1 1215 bp 42.72 3.46 95.56
NECEvent2014_8_4_scaffold_2014 178_004_scaffold_2014
Species: Streptococcus sp. HSISS3 (75%)
4 3218 bp 36.39 5.13 95.56
NECEvent2014_8_4_scaffold_1706 178_004_scaffold_1706
Species: Streptococcus salivarius CAG:79 (50%)
4 3757 bp 41.28 5.71 95.58
NECEvent2014_8_4_scaffold_4768 178_004_scaffold_4768
Species: Streptococcus salivarius (50%)
2 1249 bp 40.03 3.36 95.60
NECEvent2014_8_4_scaffold_5610 178_004_scaffold_5610
Species: Streptococcus sp. C300 (100%)
1 1026 bp 35.87 4.24 95.61
NECEvent2014_8_4_scaffold_5523 178_004_scaffold_5523
Species: Streptococcus pseudopneumoniae (100%)
1 1044 bp 35.63 3.45 95.69
NECEvent2014_8_4_scaffold_5524 178_004_scaffold_5524
Species: Streptococcus mitis (50%)
2 1044 bp 39.85 4.89 95.69
NECEvent2014_8_4_scaffold_5230 178_004_scaffold_5230
Species: Streptococcus sp. HSISS3 (50%)
2 1116 bp 36.38 2.96 95.70
NECEvent2014_8_4_scaffold_1872 178_004_scaffold_1872
Species: Streptococcus sp. HSISS2 (66.67%)
3 3451 bp 39.35 5.56 95.71
NECEvent2014_8_4_scaffold_5499 178_004_scaffold_5499
Species: Streptococcus sp. HSISS2 (50%)
2 1050 bp 39.90 5.00 95.71
NECEvent2014_8_4_scaffold_4733 178_004_scaffold_4733
Species: Streptococcus sp. C150 (50%)
2 1260 bp 43.65 4.76 95.71
NECEvent2014_8_4_scaffold_3221 178_004_scaffold_3221
Species: Streptococcus sp. HSISS3 (100%)
1 1951 bp 44.39 5.54 95.80
NECEvent2014_8_4_scaffold_4094 178_004_scaffold_4094
Species: Streptococcus sp. BS29a (50%)
2 1493 bp 42.60 4.02 95.85
NECEvent2014_8_4_scaffold_1884 178_004_scaffold_1884
Genus: Streptococcus (100%)
5 3439 bp 40.94 5.84 95.87
NECEvent2014_8_4_scaffold_3705 178_004_scaffold_3705
Species: Streptococcus salivarius (100%)
1 1673 bp 44.35 5.38 95.94
NECEvent2014_8_4_scaffold_1629 178_004_scaffold_1629
Genus: Streptococcus (100%)
3 3904 bp 38.50 5.42 95.98
NECEvent2014_8_4_scaffold_3366 178_004_scaffold_3366
Species: Streptococcus sp. HSISS2 (50%)
2 1853 bp 42.15 5.10 96.01
NECEvent2014_8_4_scaffold_2781 178_004_scaffold_2781
Species: Streptococcus mitis (50%)
2 2327 bp 42.67 5.03 96.05
NECEvent2014_8_4_scaffold_2903 178_004_scaffold_2903
Species: Streptococcus sp. HSISS2 (50%)
2 2202 bp 40.51 5.25 96.05
NECEvent2014_8_4_scaffold_1784 178_004_scaffold_1784
Species: Streptococcus sp. C150 (66.67%)
3 3607 bp 39.78 3.74 96.06
NECEvent2014_8_4_scaffold_5113 178_004_scaffold_5113
Species: Streptococcus sp. C150 (100%)
1 1146 bp 39.53 4.84 96.07
NECEvent2014_8_4_scaffold_866 178_004_scaffold_866
Species: Streptococcus sp. HSISS2 (60%)
10 7494 bp 42.39 7.45 96.08
NECEvent2014_8_4_scaffold_3991 178_004_scaffold_3991
Species: Streptococcus sp. HSISS3 (66.67%)
3 1539 bp 42.17 5.07 96.10
NECEvent2014_8_4_scaffold_935 178_004_scaffold_935
Species: Streptococcus mitis (50%)
2 6962 bp 41.20 5.69 96.14
NECEvent2014_8_4_scaffold_3500 178_004_scaffold_3500
Species: Streptococcus sp. HSISS3 (50%)
2 1771 bp 38.96 4.91 96.22
NECEvent2014_8_4_scaffold_2708 178_004_scaffold_2708
Species: Streptococcus mitis (66.67%)
3 2407 bp 42.00 3.99 96.22
NECEvent2014_8_4_scaffold_1945 178_004_scaffold_1945
Species: Streptococcus sp. C150 (50%)
4 3344 bp 42.43 5.97 96.35
NECEvent2014_8_4_scaffold_2408 178_004_scaffold_2408
Species: Streptococcus salivarius (100%)
2 2733 bp 38.68 4.61 96.38
NECEvent2014_8_4_scaffold_5186 178_004_scaffold_5186
Species: Streptococcus sp. C150 (50%)
2 1126 bp 44.49 11.32 96.45
NECEvent2014_8_4_scaffold_3261 178_004_scaffold_3261
Species: Streptococcus mitis (50%)
2 1922 bp 34.96 4.68 96.46
NECEvent2014_8_4_scaffold_1313 178_004_scaffold_1313
Species: Streptococcus sp. HSISS3 (66.67%)
6 4851 bp 42.24 5.75 96.48
NECEvent2014_8_4_scaffold_4712 178_004_scaffold_4712
Species: Streptococcus sp. HSISS3 (50%)
2 1265 bp 44.03 5.22 96.52
NECEvent2014_8_4_scaffold_4018 178_004_scaffold_4018
Species: Streptococcus mitis (50%)
2 1529 bp 34.73 2.75 96.53
NECEvent2014_8_4_scaffold_3524 178_004_scaffold_3524
Species: Streptococcus salivarius (50%)
2 1761 bp 35.43 3.75 96.59
NECEvent2014_8_4_scaffold_3241 178_004_scaffold_3241
Species: Streptococcus sp. HSISS2 (50%)
2 1937 bp 38.77 5.89 96.64
NECEvent2014_8_4_scaffold_3278 178_004_scaffold_3278
Species: Streptococcus sp. C150 (100%)
2 1912 bp 40.85 6.90 96.65
NECEvent2014_8_4_scaffold_1546 178_004_scaffold_1546
Species: Streptococcus vestibularis (50%)
2 4107 bp 42.46 7.71 96.71
NECEvent2014_8_4_scaffold_2602 178_004_scaffold_2602
Species: Streptococcus sp. SR4 (50%)
4 2524 bp 42.27 5.11 96.75
NECEvent2014_8_4_scaffold_2686 178_004_scaffold_2686
Species: Streptococcus salivarius (100%)
2 2433 bp 38.55 4.62 96.79
NECEvent2014_8_4_scaffold_1863 178_004_scaffold_1863
Species: Streptococcus sp. HSISS3 (50%)
2 3467 bp 40.96 6.40 96.83
NECEvent2014_8_4_scaffold_4025 178_004_scaffold_4025
Species: Streptococcus sp. HSISS2 (50%)
2 1527 bp 40.47 4.52 96.86
Displaying items 401-450 of 676 in total

Ribosomal proteins shown here were identified using keyword searches of all annotations.

The SCGs are found by conducting USEARCH with a custom database.

The SCGs are found by conducting USEARCH with a custom database.