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NECEvent2014_8_4_Streptococcus_mitis-rel_41_5_partial

NECEvent2014_8_4_Streptococcus_mitis_41_5
In projects: NECEvent2014_8_4

Consensus taxonomy: Streptococcus mitis  →  Streptococcus  →  Lactobacillales  →  Bacilli  →  Firmicutes  →  Bacteria

Displaying items 1-50 of 486 in total
contig # features sequence size GC content (%) Cov Coding Density (%)
NECEvent2014_8_4_scaffold_4521 178_004_scaffold_4521
Species: Streptococcus mitis (50%)
2 1321 bp 33.31 10.90 31.11
NECEvent2014_8_4_scaffold_3141 178_004_scaffold_3141
Genus: Streptococcus (75%)
4 1998 bp 36.94 5.86 38.44
NECEvent2014_8_4_scaffold_1835 178_004_scaffold_1835
Genus: Streptococcus (100%)
3 3530 bp 38.90 5.86 58.47
NECEvent2014_8_4_scaffold_4231 178_004_scaffold_4231
Species: Streptococcus mitis (100%)
3 1435 bp 37.00 3.97 58.75
NECEvent2014_8_4_scaffold_3716 178_004_scaffold_3716
Species: Streptococcus mitis (100%)
2 1670 bp 34.61 3.77 60.00
NECEvent2014_8_4_scaffold_3349 178_004_scaffold_3349
Genus: Streptococcus (100%)
3 1864 bp 38.30 3.14 62.93
NECEvent2014_8_4_scaffold_4044 178_004_scaffold_4044
Species: Streptococcus mitis (100%)
1 1521 bp 40.37 3.45 64.50
NECEvent2014_8_4_scaffold_5628 178_004_scaffold_5628
Species: Streptococcus mitis (100%)
1 1023 bp 38.81 5.13 65.40
NECEvent2014_8_4_scaffold_2778 178_004_scaffold_2778
Species: Streptococcus mitis (100%)
3 2331 bp 38.44 4.89 66.02
NECEvent2014_8_4_scaffold_2802 178_004_scaffold_2802
Species: Streptococcus mitis (66.67%)
3 2310 bp 42.12 3.90 69.35
NECEvent2014_8_4_scaffold_4331 178_004_scaffold_4331
Genus: Streptococcus (66.67%)
3 1396 bp 42.12 8.17 69.70
NECEvent2014_8_4_scaffold_4324 178_004_scaffold_4324
Genus: Streptococcus (100%)
3 1398 bp 38.98 4.61 70.17
NECEvent2014_8_4_scaffold_3489 178_004_scaffold_3489
Species: Streptococcus mitis (100%)
3 1777 bp 38.89 4.73 72.76
NECEvent2014_8_4_scaffold_5327 178_004_scaffold_5327
Species: Streptococcus mitis (100%)
2 1088 bp 41.64 7.03 72.79
NECEvent2014_8_4_scaffold_5077 178_004_scaffold_5077
Species: Streptococcus pneumoniae (50%)
2 1159 bp 42.02 3.62 72.99
NECEvent2014_8_4_scaffold_4724 178_004_scaffold_4724
Species: Streptococcus mitis (50%)
2 1261 bp 39.41 2.97 74.23
NECEvent2014_8_4_scaffold_5011 178_004_scaffold_5011
Species: Streptococcus mitis (50%)
2 1179 bp 39.02 5.47 74.55
NECEvent2014_8_4_scaffold_4817 178_004_scaffold_4817
Species: Streptococcus sp. M143 (50%)
2 1234 bp 36.79 6.81 75.61
NECEvent2014_8_4_scaffold_5043 178_004_scaffold_5043
Species: Streptococcus mitis (100%)
1 1169 bp 36.36 5.65 75.96
NECEvent2014_8_4_scaffold_4523 178_004_scaffold_4523
Genus: Streptococcus (100%)
3 1321 bp 37.85 4.43 76.53
NECEvent2014_8_4_scaffold_1989 178_004_scaffold_1989
Genus: Streptococcus (100%)
5 3264 bp 37.81 4.78 76.93
NECEvent2014_8_4_scaffold_3326 178_004_scaffold_3326
Species: Streptococcus mitis (75%)
4 1878 bp 38.29 4.15 77.00
NECEvent2014_8_4_scaffold_4317 178_004_scaffold_4317
Species: Streptococcus mitis (100%)
1 1400 bp 35.29 5.14 77.14
NECEvent2014_8_4_scaffold_2879 178_004_scaffold_2879
Genus: Streptococcus (100%)
3 2223 bp 40.71 4.93 77.46
NECEvent2014_8_4_scaffold_2668 178_004_scaffold_2668
Species: Streptococcus mitis (75%)
4 2446 bp 35.73 4.29 77.64
NECEvent2014_8_4_scaffold_3706 178_004_scaffold_3706
Genus: Streptococcus (100%)
3 1673 bp 36.28 4.12 77.82
NECEvent2014_8_4_scaffold_2764 178_004_scaffold_2764
Species: Streptococcus mitis (100%)
1 2340 bp 41.84 4.81 77.95
NECEvent2014_8_4_scaffold_2493 178_004_scaffold_2493
Species: Streptococcus mitis (100%)
2 2629 bp 41.57 5.71 78.17
NECEvent2014_8_4_scaffold_5119 178_004_scaffold_5119
Species: Streptococcus mitis (66.67%)
3 1144 bp 37.59 5.77 78.93
NECEvent2014_8_4_scaffold_5584 178_004_scaffold_5584
Genus: Streptococcus (66.67%)
3 1032 bp 34.01 4.22 79.07
NECEvent2014_8_4_scaffold_2696 178_004_scaffold_2696
Species: Streptococcus sp. HSISS3 (66.67%)
3 2418 bp 41.19 6.82 79.16
NECEvent2014_8_4_scaffold_4227 178_004_scaffold_4227
Species: Streptococcus mitis (50%)
2 1436 bp 43.45 5.33 79.18
NECEvent2014_8_4_scaffold_2702 178_004_scaffold_2702
Species: Streptococcus mitis (50%)
4 2410 bp 39.34 4.17 79.54
NECEvent2014_8_4_scaffold_4885 178_004_scaffold_4885
Species: Streptococcus mitis (100%)
1 1211 bp 35.51 4.21 79.77
NECEvent2014_8_4_scaffold_3303 178_004_scaffold_3303
Species: Streptococcus mitis (100%)
2 1891 bp 40.24 5.87 79.80
NECEvent2014_8_4_scaffold_2290 178_004_scaffold_2290
Species: Streptococcus sp. HSISS2 (60%)
5 2870 bp 39.93 4.70 80.28
NECEvent2014_8_4_scaffold_1943 178_004_scaffold_1943
Species: Streptococcus sp. HSISS3 (66.67%)
3 3349 bp 39.30 5.24 80.35
NECEvent2014_8_4_scaffold_3923 178_004_scaffold_3923
Species: Streptococcus mitis (100%)
2 1568 bp 37.24 6.22 80.36
NECEvent2014_8_4_scaffold_5206 178_004_scaffold_5206
Species: Streptococcus mitis (100%)
2 1122 bp 35.20 4.28 80.75
NECEvent2014_8_4_scaffold_2710 178_004_scaffold_2710
Genus: Streptococcus (100%)
3 2406 bp 40.94 5.24 80.80
NECEvent2014_8_4_scaffold_4024 178_004_scaffold_4024
Species: Streptococcus mitis (100%)
2 1528 bp 34.10 4.22 81.09
NECEvent2014_8_4_scaffold_1930 178_004_scaffold_1930
Species: Streptococcus mitis (80%)
5 3372 bp 40.60 4.27 81.23
NECEvent2014_8_4_scaffold_3150 178_004_scaffold_3150
Genus: Streptococcus (100%)
3 1992 bp 40.41 4.52 81.63
NECEvent2014_8_4_scaffold_3171 178_004_scaffold_3171
Species: Streptococcus mitis (66.67%)
3 1976 bp 39.42 5.24 81.68
NECEvent2014_8_4_scaffold_3466 178_004_scaffold_3466
Genus: Streptococcus (66.67%)
3 1792 bp 43.14 6.36 82.03
NECEvent2014_8_4_scaffold_4539 178_004_scaffold_4539
Species: Streptococcus mitis (100%)
2 1316 bp 41.57 5.59 82.07
NECEvent2014_8_4_scaffold_2165 178_004_scaffold_2165
Species: Streptococcus pneumoniae (50%)
2 3030 bp 41.88 5.20 82.38
NECEvent2014_8_4_scaffold_3154 178_004_scaffold_3154
Genus: Streptococcus (50%)
4 1989 bp 38.81 5.28 82.45
NECEvent2014_8_4_scaffold_3718 178_004_scaffold_3718
Genus: Streptococcus (100%)
3 1669 bp 38.59 3.95 82.50
NECEvent2014_8_4_scaffold_2212 178_004_scaffold_2212
Species: Streptococcus mitis (75%)
4 2959 bp 40.89 4.41 82.63
Displaying items 1-50 of 486 in total

Ribosomal proteins shown here were identified using keyword searches of all annotations.

The SCGs are found by conducting USEARCH with a custom database.

The SCGs are found by conducting USEARCH with a custom database.