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NECEvent2014_8_5_scaffold_51_43

Organism: NECEvent2014_8_5_Clostridium_paraputrificum_29_42

near complete RP 49 / 55 MC: 1 BSCG 51 / 51 ASCG 15 / 38 MC: 2
Location: 41907..42593

Top 3 Functional Annotations

Value Algorithm Source
Two component transcriptional regulator, winged helix family n=1 Tax=Clostridium acidurici (strain ATCC 7906 / DSM 604 / KCTC 5404 / 9a) RepID=K0B3E5_CLOA9 similarity UNIREF
DB: UNIREF100
  • Identity: 62.2
  • Coverage: 225.0
  • Bit_score: 274
  • Evalue 8.00e-71
winged helix family two component transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 62.2
  • Coverage: 225.0
  • Bit_score: 274
  • Evalue 2.20e-71
Two component transcriptional regulator, winged helix family {ECO:0000313|EMBL:AFS79697.1}; TaxID=1128398 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Gottschalkia.;" source="Clostridium similarity UNIPROT
DB: UniProtKB
  • Identity: 62.2
  • Coverage: 225.0
  • Bit_score: 274
  • Evalue 1.10e-70

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Taxonomy

Gottschalkia acidurici → Gottschalkia → Clostridiales → Clostridia → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 687
ATGAAAAAGATACTAATAATAGAAGACGACAGAGCATTAAATAAAGGAATTACTTTTAATTTAAAAGAAGAAGGTTTTGATGTAAAGGGAGTATATTCACTTTTTGAAGGAAGATTAGAAATAGAAAAGGACTATGACTTAATAATTTTAGATGTTAATCTTCCAGATGGAAGTGGCTTTGATTTATGTAGTGAGATCAGATTAAAGAACAAAAATACTGCAATTATATTTTTAAGTGCTTGTGATATGGAGTTTGATATAGTTAATGGTTTTAAACTTGGAGCAGATGATTATATAACTAAGCCATTTAGCTTAAGTATTATGAAAGAAAGGGTACAAGCTGTACTAAGAAGGTATGAAGGCAATAAAAAAACTTATATTTATAAGATTAATAATTTAGAGATTGATTTTGATAAATTTATACTTAATAAAAATGGAGAGAGAGTTGATATTACTCCAACAGAGTTTAAGCTTTTAAAGGTTTTTGTTAATTCAAAAGGAAAAGTTCTTACAAGAAATAATCTTTTAGAGGAGCTGTGGGATAAAGATCAGAACTTTATTGATGAACATGCCCTAACAGTAAATATAAATAGATTGAGAAGCAAAATTGAAAGTAAGGATGATGGAGTGAAGTATATAAAGACAATATATGGTATAGGTTATATGTGGATTGGAGAGGATGCATAA
PROTEIN sequence
Length: 229
MKKILIIEDDRALNKGITFNLKEEGFDVKGVYSLFEGRLEIEKDYDLIILDVNLPDGSGFDLCSEIRLKNKNTAIIFLSACDMEFDIVNGFKLGADDYITKPFSLSIMKERVQAVLRRYEGNKKTYIYKINNLEIDFDKFILNKNGERVDITPTEFKLLKVFVNSKGKVLTRNNLLEELWDKDQNFIDEHALTVNINRLRSKIESKDDGVKYIKTIYGIGYMWIGEDA*