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NECEvent2014_8_5_scaffold_111_5

Organism: NECEvent2014_8_5_Clostridium_paraputrificum_29_42

near complete RP 49 / 55 MC: 1 BSCG 51 / 51 ASCG 15 / 38 MC: 2
Location: comp(3551..4555)

Top 3 Functional Annotations

Value Algorithm Source
Periplasmic binding s and sugar binding domain of LacI family protein n=4 Tax=Clostridium difficile RepID=T3SRK4_CLODI similarity UNIREF
DB: UNIREF100
  • Identity: 61.7
  • Coverage: 334.0
  • Bit_score: 416
  • Evalue 2.50e-113
  • rbh
Transcriptional regulator, LacI family {ECO:0000313|EMBL:AJH02029.1}; TaxID=1520 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium beijerinck similarity UNIPROT
DB: UniProtKB
  • Identity: 60.9
  • Coverage: 335.0
  • Bit_score: 412
  • Evalue 5.00e-112
transcriptional regulator, LacI family similarity KEGG
DB: KEGG
  • Identity: 60.0
  • Coverage: 335.0
  • Bit_score: 410
  • Evalue 6.60e-112

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Taxonomy

Clostridium beijerinckii → Clostridium → Clostridiales → Clostridia → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 1005
ATGAAGACAATAATGCAAGATATTGCAAAATTAGCACAAGTATCTCCTGGAACAGTTTCTAATGCCCTTAATAACAGAAAAGGAGTAGGGAAAGAAACGAAGGAGAGAATACTGAAGATAGCAGAAGAATTAGGATACTTCAAAACTCAAAAAAAGAGTGAAGATAAAATAATTAGAATGATAAAATTCAAAAAACATGGATATATATTATCAGATACTCCATTCTTTTCAAAGTTAATTGAATCTTGTGAAAGAACTTGCAGAAATAGTGGGTATGAACTTTTAATTACTCAAGTTGAAGCTGGAAAAGATACTAAGGAAGATATACAAAAAATATTTACTCAAAAGAGAGTAGATGGAATATTGCTTTTAGGAACTGAGATGGAAGAAGAAGATTTTAGTGAGTTTGAAAATCTAAATATTCCAATGGTAGTTGTAGATACTTATTTTAAAGCTAAGGATTGTGATTTTGTTCTTATTAATAACGATAGAGGAGCATATTTAGCTACTAAATATATAATTGATAGAGGTATTAAGGATATTGGTTATATAGGTAGTACTGTAGATATTAGCAACTTTAAGTGTCGTAAAGAAGGATTCTTTCAGTCAATGAAAGAGCATAACCTAGAGGTTCATGAAGAGAATATGTATAAGGTAGAACCAACTACAGATGGAGCCTATAGAGATTTTAAAGAGATATTATCAAATGAAAATATAAAACTTCCAAAAGCATTGTTTGCATTTAATGATATTATTGCATTAGGTGCAATAAAAGCTATGAATGAAAAAGGAATTAAAATTCCTGAAGATGTGTCCATAGTTGGATTTGATGATATTCCATTTAGTGATATGATAAATCCTCCAATGACTACTGTAAGAGTAGATGTTGAAAGATTAGGCAAGGTTTCTATTAATAGACTAATAGAAAAGATAGAAGAAGAGGATGAAGGAAAACTAAAAGTACAAATATCTACTGATATTGTTGAAAGAAAAAGTGTTATATAA
PROTEIN sequence
Length: 335
MKTIMQDIAKLAQVSPGTVSNALNNRKGVGKETKERILKIAEELGYFKTQKKSEDKIIRMIKFKKHGYILSDTPFFSKLIESCERTCRNSGYELLITQVEAGKDTKEDIQKIFTQKRVDGILLLGTEMEEEDFSEFENLNIPMVVVDTYFKAKDCDFVLINNDRGAYLATKYIIDRGIKDIGYIGSTVDISNFKCRKEGFFQSMKEHNLEVHEENMYKVEPTTDGAYRDFKEILSNENIKLPKALFAFNDIIALGAIKAMNEKGIKIPEDVSIVGFDDIPFSDMINPPMTTVRVDVERLGKVSINRLIEKIEEEDEGKLKVQISTDIVERKSVI*