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NECEvent2014_8_5_scaffold_111_19

Organism: NECEvent2014_8_5_Clostridium_paraputrificum_29_42

near complete RP 49 / 55 MC: 1 BSCG 51 / 51 ASCG 15 / 38 MC: 2
Location: comp(17731..18426)

Top 3 Functional Annotations

Value Algorithm Source
Two-component response regulator (YcbM) n=1 Tax=Bacillus subtilis subsp. spizizenii ATCC 6633 RepID=D5N2T7_BACPN similarity UNIREF
DB: UNIREF100
  • Identity: 64.2
  • Coverage: 226.0
  • Bit_score: 305
  • Evalue 3.30e-80
  • rbh
PhoP family transcriptional regulator {ECO:0000313|EMBL:KJJ41622.1}; TaxID=1423 species="Bacteria; Firmicutes; Bacilli; Bacillales; Bacillaceae; Bacillus.;" source="Bacillus subtilis.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 65.0
  • Coverage: 226.0
  • Bit_score: 310
  • Evalue 1.90e-81
sensory transduction protein YcbL similarity KEGG
DB: KEGG
  • Identity: 63.7
  • Coverage: 226.0
  • Bit_score: 304
  • Evalue 2.10e-80

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Taxonomy

Bacillus subtilis → Bacillus → Bacillales → Bacilli → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 696
ATGAAGAGAATTTTGTTAGTTGAAGATGAAAAAGAGATTTCTTTAATGGTTAAGAATTATTTAACTAAGGAAGGGTATATAGTTGATACTGCTTTTAATGGTGAAGAGGGGCTATTTCAATTTAGGCGGAAGGATTATTCCTTAGTTATCTTAGATATAATGATGCCAAAGATGGATGGTATTGAGCTTATAAAAAGAATAAGAGAAAAGAGTAATGTGCCAGCAATTATTTTATCAGCAAAGGATGGAGAAATAGATAAGGCTTTAGGACTAGGATTTGGTGCTGATGATTATGTAGCCAAGCCTTTTTCAATGGTTGAGTTATCTGCAAGGGTTAAGGCTGCAATAAGAAGAGCTACTGAGTATTCTAATGAAGAAGTTAAGCAAAATAAGGTAATTAAAGTAGATGATTTAATAATAGATATAAATAATTATTCAGTAAAAAGAGGAGATGAGGATTTAAAGTTAACAAATAAGGAGTTTGAAATATTTAAGCTTTTTTTAACTAATCCTAATATAGTTTTTACCAAGGAACAGATTTATAGACAAGTATGGGAAGATGAGTTTATGGGAGATGACAATATAATAAATGTTCATATAAGAAGATTAAGGGAAAAGGTAGAGAGAGATCCATCAAAACCTAAATATATAAAAACTCTATGGGGAATAGGGTACAAGTATGAGAGGAAAGAGTAA
PROTEIN sequence
Length: 232
MKRILLVEDEKEISLMVKNYLTKEGYIVDTAFNGEEGLFQFRRKDYSLVILDIMMPKMDGIELIKRIREKSNVPAIILSAKDGEIDKALGLGFGADDYVAKPFSMVELSARVKAAIRRATEYSNEEVKQNKVIKVDDLIIDINNYSVKRGDEDLKLTNKEFEIFKLFLTNPNIVFTKEQIYRQVWEDEFMGDDNIINVHIRRLREKVERDPSKPKYIKTLWGIGYKYERKE*