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NECEvent2014_8_5_scaffold_42

Alias: 178_005_scaffold_42

Search features with annotation key words

Displaying items 1-30 of 74 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
NECEvent2014_8_5_scaffold_42_1
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

2..469
DNA (468bp) protein (156aa)
Uncharacterized protein n=3 Tax=Clostridium perfringens RepID=B1R907_CLOPF rbh
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EDT23348.1}; TaxID=451754 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens B str. ATCC
NECEvent2014_8_5_scaffold_42_2
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

516..935
DNA (420bp) protein (140aa)
Uncharacterized protein n=3 Tax=Clostridium perfringens RepID=Q8XJF6_CLOPE
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EDT23340.1}; TaxID=451754 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens B str. ATCC
NECEvent2014_8_5_scaffold_42_3
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(1264..1851)
DNA (588bp) protein (196aa)
Segregation and condensation protein B n=9 Tax=Clostridium perfringens RepID=SCPB_CLOP1 rbh
scpB; segregation and condensation protein B
Segregation and condensation protein B {ECO:0000256|HAMAP-Rule:MF_01804, ECO:0000256|SAAS:SAAS00086417}; TaxID=883064 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostrid
NECEvent2014_8_5_scaffold_42_4
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(1823..2590)
DNA (768bp) protein (256aa)
Segregation and condensation protein A n=7 Tax=Clostridium perfringens RepID=SCPA_CLOP1 rbh
scpA; segregation and condensation protein A
Segregation and condensation protein A {ECO:0000256|HAMAP-Rule:MF_01805, ECO:0000256|SAAS:SAAS00093938}; TaxID=488537 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostrid
NECEvent2014_8_5_scaffold_42_5
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(2861..4069)
DNA (1209bp) protein (403aa)
D-alanyl-D-alanine carboxypeptidase {ECO:0000313|EMBL:EDT23278.1}; EC=3.4.16.4 {ECO:0000313|EMBL:EDT23278.1};; TaxID=451754 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Cl
dacF; D-alanyl-D-alanine carboxypeptidase (EC:3.4.16.4)
D-alanyl-D-alanine carboxypeptidase n=1 Tax=Clostridium perfringens B str. ATCC 3626 RepID=B1R903_CLOPF rbh
NECEvent2014_8_5_scaffold_42_6
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(4321..5622)
DNA (1302bp) protein (434aa)
pdp; pyrimidine-nucleoside phosphorylase (EC:2.4.2.2)
Pyrimidine-nucleoside phosphorylase {ECO:0000313|EMBL:EDT15106.1}; EC=2.4.2.2 {ECO:0000313|EMBL:EDT15106.1};; TaxID=451755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clo
Pyrimidine-nucleoside phosphorylase n=5 Tax=Clostridium perfringens RepID=H7CXK2_CLOPF rbh
NECEvent2014_8_5_scaffold_42_7
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(5869..6741)
DNA (873bp) protein (291aa)
Tyrosine recombinase XerD n=10 Tax=Clostridium perfringens RepID=H7CXK3_CLOPF rbh
xerD; tyrosine recombinase XerD
Tyrosine recombinase XerD {ECO:0000313|EMBL:EDT15142.1}; TaxID=451755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens E str. JG
NECEvent2014_8_5_scaffold_42_8
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(6782..7411)
DNA (630bp) protein (210aa)
Stage II sporulation protein M n=6 Tax=Clostridium perfringens RepID=H7CXK4_CLOPF rbh
sporulation protein
Stage II sporulation protein M {ECO:0000313|EMBL:EIA16659.1}; TaxID=883064 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens F262
NECEvent2014_8_5_scaffold_42_9
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(7545..8075)
DNA (531bp) protein (177aa)
Hydrolase, NUDIX family n=3 Tax=Clostridium perfringens RepID=Q0TPE6_CLOP1 rbh
NUDIX family hydrolase
Hydrolase, NUDIX family {ECO:0000313|EMBL:EDT26332.1}; TaxID=451756 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens CPE str. F4
NECEvent2014_8_5_scaffold_42_10
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(8137..8442)
DNA (306bp) protein (102aa)
Uncharacterized protein n=8 Tax=Clostridium perfringens RepID=H7CXK6_CLOPF
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EDT15118.1}; TaxID=451755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens E str. JGS1
NECEvent2014_8_5_scaffold_42_11
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(8519..9349)
DNA (831bp) protein (277aa)
Spo0A protein n=9 Tax=Clostridium perfringens RepID=Q0TPE4_CLOP1 rbh
spo0A; Spo0A protein
Stage 0 sporulation protein A homolog {ECO:0000256|PIRNR:PIRNR002937}; TaxID=451755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfrin
NECEvent2014_8_5_scaffold_42_12
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(9523..10683)
DNA (1161bp) protein (387aa)
Stage IV sporulation protein B n=5 Tax=Clostridium perfringens RepID=Q0TPE3_CLOP1 rbh
stage IV sporulation protein B
Stage IV sporulation protein B {ECO:0000313|EMBL:EDT15158.1}; TaxID=451755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens E st
NECEvent2014_8_5_scaffold_42_13
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(10860..12557)
DNA (1698bp) protein (566aa)
DNA repair protein RecN n=2 Tax=Clostridium perfringens RepID=Q0TPE2_CLOP1 rbh
recN; DNA repair protein RecN
DNA repair protein RecN {ECO:0000256|PIRNR:PIRNR003128}; Recombination protein N {ECO:0000256|PIRNR:PIRNR003128}; TaxID=451754 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae;
NECEvent2014_8_5_scaffold_42_14
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(12573..13025)
DNA (453bp) protein (151aa)
Arginine repressor n=9 Tax=Clostridium perfringens RepID=H7CXL0_CLOPF
argR; arginine repressor ArgR
Arginine repressor {ECO:0000256|HAMAP-Rule:MF_00173}; TaxID=451755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens E str. JGS19
NECEvent2014_8_5_scaffold_42_15
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(13048..13878)
DNA (831bp) protein (277aa)
NAD kinase {ECO:0000256|HAMAP-Rule:MF_00361, ECO:0000256|SAAS:SAAS00037468}; EC=2.7.1.23 {ECO:0000256|HAMAP-Rule:MF_00361, ECO:0000256|SAAS:SAAS00037533};; ATP-dependent NAD kinase {ECO:0000256|HAMAP-
Probable inorganic polyphosphate/ATP-NAD kinase n=3 Tax=Clostridium perfringens RepID=PPNK_CLOPE rbh
NAD(+)/NADH kinase
NECEvent2014_8_5_scaffold_42_16
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(13963..14778)
DNA (816bp) protein (272aa)
Hemolysin A n=2 Tax=Clostridium perfringens RepID=H7CXL2_CLOPF rbh
hlyD; hemolysin A
Probable hemolysin {ECO:0000313|EMBL:BAB81524.1}; TaxID=195102 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens (strain 13 / Typ
NECEvent2014_8_5_scaffold_42_17
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(14790..16649)
DNA (1860bp) protein (620aa)
dxs; 1-deoxy-D-xylulose-5-phosphate synthase (EC:2.2.1.7)
1-deoxy-D-xylulose-5-phosphate synthase {ECO:0000256|HAMAP-Rule:MF_00315, ECO:0000256|SAAS:SAAS00085897}; EC=2.2.1.7 {ECO:0000256|HAMAP-Rule:MF_00315, ECO:0000256|SAAS:SAAS00085897};; 1-deoxyxylulose-
1-deoxy-D-xylulose-5-phosphate synthase n=1 Tax=Clostridium perfringens WAL-14572 RepID=H1CSF3_CLOPF rbh
NECEvent2014_8_5_scaffold_42_18
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(16670..17542)
DNA (873bp) protein (291aa)
ispA; geranyltranstransferase (EC:2.5.1.10)
Geranyltranstransferase n=4 Tax=Clostridium perfringens RepID=H7CXL4_CLOPF rbh
Geranyltranstransferase {ECO:0000313|EMBL:EIA16669.1}; TaxID=883064 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens F262.;"
NECEvent2014_8_5_scaffold_42_19
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(17532..17759)
DNA (228bp) protein (76aa)
xseB; exodeoxyribonuclease VII small subunit (EC:3.1.11.6)
Exodeoxyribonuclease 7 small subunit {ECO:0000256|HAMAP-Rule:MF_00337, ECO:0000256|SAAS:SAAS00198685}; EC=3.1.11.6 {ECO:0000256|HAMAP-Rule:MF_00337, ECO:0000256|SAAS:SAAS00198686};; Exodeoxyribonuclea
Exodeoxyribonuclease 7 small subunit n=10 Tax=Clostridium perfringens RepID=EX7S_CLOP1
NECEvent2014_8_5_scaffold_42_20
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(17778..18980)
DNA (1203bp) protein (401aa)
Exodeoxyribonuclease 7 large subunit {ECO:0000256|HAMAP-Rule:MF_00378, ECO:0000256|SAAS:SAAS00195504}; EC=3.1.11.6 {ECO:0000256|HAMAP-Rule:MF_00378, ECO:0000256|SAAS:SAAS00195506};; Exodeoxyribonuclea
xseA; exodeoxyribonuclease VII large subunit (EC:3.1.11.6)
Exodeoxyribonuclease 7 large subunit n=1 Tax=Clostridium perfringens NCTC 8239 RepID=B1RKW5_CLOPF rbh
NECEvent2014_8_5_scaffold_42_21
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(18982..19815)
DNA (834bp) protein (278aa)
folD; bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/5,10-methylene-tetrahydrofolate cyclohydrolase (EC:1.5.1.5 3.5.4.9)
Bifunctional protein FolD {ECO:0000255|HAMAP-Rule:MF_01576}; Includes:; Methylenetetrahydrofolate dehydrogenase {ECO:0000255|HAMAP-Rule:MF_01576}; EC=1.5.1.5 {ECO:0000255|HAMAP-Rule:MF_01576};; Includ
Bifunctional protein FolD n=1 Tax=Clostridium perfringens (strain ATCC 13124 / NCTC 8237 / Type A) RepID=FOLD_CLOP1 rbh
NECEvent2014_8_5_scaffold_42_22
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(19865..20272)
DNA (408bp) protein (136aa)
N utilization substance protein B homolog n=9 Tax=Clostridium perfringens RepID=NUSB_CLOP1
nusB; transcription antitermination protein NusB
N utilization substance protein B homolog {ECO:0000256|HAMAP-Rule:MF_00073, ECO:0000256|SAAS:SAAS00057003}; Short=Protein NusB {ECO:0000256|HAMAP-Rule:MF_00073};; TaxID=451755 species="Bacteria; Firmi
NECEvent2014_8_5_scaffold_42_23
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(20391..20780)
DNA (390bp) protein (130aa)
Alkaline shock protein n=10 Tax=Clostridium perfringens RepID=H7CXL9_CLOPF
asp; alkaline shock protein
Alkaline shock protein {ECO:0000313|EMBL:EDT26326.1}; TaxID=451756 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens CPE str. F49
NECEvent2014_8_5_scaffold_42_24
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(20865..21362)
DNA (498bp) protein (166aa)
Stage III sporulation protein AH n=10 Tax=Clostridium perfringens RepID=H7CXM0_CLOPF rbh
stage III sporulation protein AH
Stage III sporulation protein AH {ECO:0000313|EMBL:EIA16675.1}; TaxID=883064 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens F2
NECEvent2014_8_5_scaffold_42_25
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(21388..21993)
DNA (606bp) protein (202aa)
Stage III sporulation protein AG n=1 Tax=Clostridium perfringens WAL-14572 RepID=H1CSG1_CLOPF rbh
spoIIIAG; stage III sporulation protein AG
Stage III sporulation protein AG {ECO:0000313|EMBL:BAB81533.1}; TaxID=195102 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens (s
NECEvent2014_8_5_scaffold_42_26
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(22008..22565)
DNA (558bp) protein (186aa)
Stage III sporulation protein AF n=2 Tax=Clostridium perfringens RepID=Q0TPC9_CLOP1 rbh
spoIIIAF; stage III sporulation protein AF
Stage III sporulation protein AF {ECO:0000313|EMBL:EDT26293.1}; TaxID=451756 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens CP
NECEvent2014_8_5_scaffold_42_27
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(22573..23745)
DNA (1173bp) protein (391aa)
Stage III sporulation protein AE n=4 Tax=Clostridium perfringens RepID=H7CXM3_CLOPF rbh
stage III sporulation protein AE
Stage III sporulation protein AE {ECO:0000313|EMBL:EIA16678.1}; TaxID=883064 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens F2
NECEvent2014_8_5_scaffold_42_28
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(23756..24142)
DNA (387bp) protein (129aa)
Stage III sporulation protein AD n=10 Tax=Clostridium perfringens RepID=H7CXM4_CLOPF
stage III sporulation protein AD
Stage III sporulation protein AD {ECO:0000313|EMBL:EDT26307.1}; TaxID=451756 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens CP
NECEvent2014_8_5_scaffold_42_29
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(24230..24427)
DNA (198bp) protein (66aa)
Stage III sporulation protein AC n=10 Tax=Clostridium perfringens RepID=H7CXM5_CLOPF
stage III sporulation protein AC
Stage III sporulation protein AC {ECO:0000313|EMBL:EDT15138.1}; TaxID=451755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens E
NECEvent2014_8_5_scaffold_42_30
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(24503..25018)
DNA (516bp) protein (172aa)
Stage III sporulation protein AB n=7 Tax=Clostridium perfringens RepID=Q0SRZ2_CLOPS rbh
stage III sporulation protein SpoAB
Stage III sporulation protein AB {ECO:0000313|EMBL:EDT26298.1}; TaxID=451756 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens CP
Displaying items 1-30 of 74 in total

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