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NECEvent2014_8_5_scaffold_628

Alias: 178_005_scaffold_628

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Displaying 19 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
NECEvent2014_8_5_scaffold_628_trna_1
unknown

Not on your lists

205..277
DNA (73bp)
transferRNA
NECEvent2014_8_5_scaffold_628_trna_2
unknown

Not on your lists

285..356
DNA (72bp)
transferRNA
NECEvent2014_8_5_scaffold_628_1
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(730..1638)
DNA (909bp) protein (303aa)
Uncharacterized protein n=1 Tax=Clostridium perfringens (strain 13 / Type A) RepID=Q8XHM5_CLOPE rbh
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAB82164.1}; TaxID=195102 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens (strain 13
NECEvent2014_8_5_scaffold_628_2
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(1703..2647)
DNA (945bp) protein (315aa)
Putative cation transporter n=2 Tax=Clostridium perfringens RepID=Q0SQ93_CLOPS rbh
magnesium and cobalt transporter
Putative cation transporter {ECO:0000313|EMBL:ABG86223.1}; TaxID=289380 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens (strain
NECEvent2014_8_5_scaffold_628_3
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

2922..3419
DNA (498bp) protein (166aa)
Uncharacterized protein n=1 Tax=Clostridium perfringens C str. JGS1495 RepID=B1BK50_CLOPF rbh
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EDS79844.1}; TaxID=445334 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens C str. JGS1
NECEvent2014_8_5_scaffold_628_4
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(3447..4616)
DNA (1170bp) protein (390aa)
Amidohydrolase homolog n=1 Tax=Clostridium perfringens C str. JGS1495 RepID=B1BK49_CLOPF rbh
Amidohydrolase homolog {ECO:0000313|EMBL:EDS79841.1}; TaxID=445334 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens C str. JGS14
amidohydrolase
NECEvent2014_8_5_scaffold_628_5
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

4772..4948
DNA (177bp) protein (59aa)
Probable sigma-F transcribed protein n=10 Tax=Clostridium perfringens RepID=Q8XHM9_CLOPE
putative csfB protein
Putative csfB protein {ECO:0000313|EMBL:EDT26017.1}; TaxID=451756 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens CPE str. F496
NECEvent2014_8_5_scaffold_628_6
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

4966..6396
DNA (1431bp) protein (477aa)
Putative uncharacterized protein n=1 Tax=Clostridium perfringens WAL-14572 RepID=H1CVD1_CLOPF rbh
Orn/Lys/Arg decarboxylase {ECO:0000313|EMBL:EDS79852.1}; TaxID=445334 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens C str. JG
Orn/Lys/Arg decarboxylase
NECEvent2014_8_5_scaffold_628_7
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

6643..7233
DNA (591bp) protein (197aa)
Guanylate kinase-like protein n=7 Tax=Clostridium perfringens RepID=H7CZF7_CLOPF rbh
gmk; guanylate kinase
Guanylate kinase-like protein {ECO:0000313|EMBL:EIA15965.1}; TaxID=883064 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens F262.
NECEvent2014_8_5_scaffold_628_8
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

7250..7405
DNA (156bp) protein (52aa)
Uncharacterized protein n=10 Tax=Clostridium perfringens RepID=H7CZF6_CLOPF
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EDT26018.1}; TaxID=451756 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens CPE str. F4
NECEvent2014_8_5_scaffold_628_9
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

7562..7891
DNA (330bp) protein (110aa)
Uncharacterized protein n=2 Tax=Clostridium perfringens RepID=B1BK44_CLOPF
Uncharacterized protein {ECO:0000313|EMBL:EDS79823.1}; TaxID=445334 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens C str. JGS1
hypothetical protein
NECEvent2014_8_5_scaffold_628_10
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

7913..8836
DNA (924bp) protein (308aa)
holB; DNA polymerase III subunit delta' (EC:2.7.7.7)
DNA polymerase III delta' subunit n=5 Tax=Clostridium perfringens RepID=Q8XHN4_CLOPE rbh
DNA polymerase III delta' subunit {ECO:0000313|EMBL:BAB82155.1}; TaxID=195102 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens (
NECEvent2014_8_5_scaffold_628_11
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

8839..9744
DNA (906bp) protein (302aa)
PSP1 domain-containing protein n=10 Tax=Clostridium perfringens RepID=H7CZF3_CLOPF rbh
PSP1 domain-containing protein
Signal peptidase-like protein {ECO:0000313|EMBL:BAB82154.1}; TaxID=195102 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens (stra
NECEvent2014_8_5_scaffold_628_12
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

9913..10083
DNA (171bp) protein (57aa)
Ferredoxin n=11 Tax=Clostridium perfringens RepID=FER_CLOPE
ferredoxin (fdxA)
Putative ferredoxin {ECO:0000313|EMBL:ABG86239.1}; TaxID=289380 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens (strain SM101 /
NECEvent2014_8_5_scaffold_628_13
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(10198..10851)
DNA (654bp) protein (218aa)
Putative zinc-dependent hydrolase n=1 Tax=Clostridium perfringens (strain SM101 / Type A) RepID=Q0SQA4_CLOPS rbh
zinc-dependent hydrolase
Putative zinc-dependent hydrolase {ECO:0000313|EMBL:ABG87696.1}; TaxID=289380 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens (
NECEvent2014_8_5_scaffold_628_14
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

11068..11523
DNA (456bp) protein (152aa)
Transcriptional regulator CtsR n=10 Tax=Clostridium perfringens RepID=H7CZE9_CLOPF
transcriptional repressor
Transcriptional repressor {ECO:0000313|EMBL:EDT71230.1}; TaxID=488537 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens D str. JG
NECEvent2014_8_5_scaffold_628_15
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

11471..12070
DNA (600bp) protein (200aa)
Uncharacterized protein n=1 Tax=Clostridium perfringens (strain 13 / Type A) RepID=Q8XHN9_CLOPE rbh
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAB82149.1}; TaxID=195102 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens (strain 13
NECEvent2014_8_5_scaffold_628_16
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

12054..13067
DNA (1014bp) protein (338aa)
Protein-arginine kinase {ECO:0000256|HAMAP-Rule:MF_00602, ECO:0000256|SAAS:SAAS00166216}; EC=2.7.14.1 {ECO:0000256|HAMAP-Rule:MF_00602, ECO:0000256|SAAS:SAAS00166206};; TaxID=488537 species="Bacteria;
Putative ATP:guanido phosphotransferase HMPREF9476_02490 n=1 Tax=Clostridium perfringens WAL-14572 RepID=H1CVB9_CLOPF rbh
ATP:guanido phosphotransferase
NECEvent2014_8_5_scaffold_628_17
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

13092..15536
DNA (2445bp) protein (815aa)
clpC; negative regulator of genetic competence MecB/ClpC (EC:3.4.21.-)
Negative regulator of genetic competence MecB/ClpC {ECO:0000313|EMBL:EDT14449.1}; EC=3.4.21.- {ECO:0000313|EMBL:EDT14449.1};; TaxID=451755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clo
Negative regulator of genetic competence MecB/ClpC n=2 Tax=Clostridium perfringens RepID=Q0TML1_CLOP1 rbh
Displaying 19 items

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