ggKbase home page

NECEvent2014_8_5_scaffold_1578_1

Organism: NECEvent2014_8_5_Clostridium_perfringens_28_24

near complete RP 51 / 55 MC: 1 BSCG 51 / 51 MC: 1 ASCG 15 / 38 MC: 1
Location: comp(237..1862)

Top 3 Functional Annotations

Value Algorithm Source
Radical SAM domain protein n=1 Tax=Clostridium perfringens CPE str. F4969 RepID=B1RG58_CLOPF similarity UNIREF
DB: UNIREF100
  • Identity: 99.8
  • Coverage: 541.0
  • Bit_score: 1101
  • Evalue 0.0
  • rbh
Radical SAM domain protein {ECO:0000313|EMBL:EDT27064.1}; TaxID=451756 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens CPE str. similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 541.0
  • Bit_score: 1102
  • Evalue 0.0
radical SAM domain-containing protein similarity KEGG
DB: KEGG
  • Identity: 99.8
  • Coverage: 541.0
  • Bit_score: 1101
  • Evalue 0.0

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Clostridium perfringens → Clostridium → Clostridiales → Clostridia → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 1626
GTGAGGTACCTGAAGGCATTTACAAAGGATTTAGATTTCCAAGGTGATATAAAAGAATTTTCAATAAATGATAGAGTTGAGAATATTTTAGAAGGTATTATTGAGGAGAAACCAGATGTAGTGGCTTTCTCCTGTTACATATGGAATATGGAATTTGTAAATAGACTAGCTGAACTTATAAAACTTGTTGATCCTAATATAGAAATACTTTATGGCGGACCAGAAGTTTCTTATGAAGGAAAAGAATTTTTAGAAAATCATGAAGGTGAATATGTAATAGTAGGAGAAGGAGAAAAAACTTTTAGAGAGTTTGTTCTTTATAAGCTTGGAGAAGGAAAAATAGAAGATATAAAAGGCTTAAACTACAAGAGGGACGGAAAAGTCTTTGAAAATCCTAAAAGACCTGAAATGGATATGAATGAATTAGTGTTCCCTTATACTTATGAAGAAGATATAAACAATAAGATTGTTTACTATGAAGCTTCAAGGGGGTGTCCTTTTAAATGTAAATATTGCCTTTCATCTGTAATGCATGGAGTTAGGTTCTTAGATGTAGAAAGAGTAAAGAAAGAATTAAAATACTTCATGGAAAGAGGATTAAAATTAGTTAAGTTTGTTGATAGAACTTTTAACTGTAATAGAGAATACACAGTGGAGCTTCTTAAATATTTAAGTGAACAGGATACAGAGACAAGATTCCATTTTGAGGTTGCAGCAGATCTTTTAACAGAGGAGCAAATAGAAATATTAAATAATGCTCCAAAGGGAAGATTCCAATTAGAGGTTGGAGTTCAAACTACAAATAATGAAGTCTTACATAATATAAATAGATATATTACATATGAAAATATAAAAGAGAAAGTATTAAAAGTTGCATCAGGAAAAAATGTAATGCAACATTTAGATTTAATTGCAGGACTACCAGGAGAAGATTTAGAATCATTTAAAAAATCTTTTAATGATGTTCATGCCATAAGACCAGATGAAATTCAATTAGGTTTCCTAAAATTATTAAAGGGATCTTCAATGAGAGAGGAAGCTGAAAAGTGGGGAATAGTTTATTCACCTTATGCTCCATATGAAATAATAAGAAGTAAAGATATAAGTTATGAAGAACTTTTATTATTAAAGAAAGTGGAAGCAATGGTTGATAAATACTATAATTCATGTAAATTTAATAATGTAATTAAATTCTTCTTAAATATATATGATAAGCCTTTTGATTTCTATTATGATTTAGCTATGTTCTTTGAAGAGAAGGGTAATTTCAAGAGAAGCATAGGAAATGTTGAATATTATAAGATATTATTAGATTTTTATCTTGAGAAGATAGGAGGAGAGGATGAAGGTCTATTTAAGGAAGTTTTAAAATTTGATTATTTATGCTTTAATAAAAAGAGGTGGTTACCAGACTTTTTAGTTAGAACAATTACAAAAGAAGATGAGCAAAATATAAAAGATAGTTTTGATAGACAAATGCCATTTAAAAAAGCTCATATAGAAAAATTTGAAATAGATATAATTAATTACATTAAAAATGGGGAAATTAACTTTGAACCAAAATATCTTATATTTGATGAAATGAATTTTGACTATAATTCATATGTAGAAGTAGAAATGAAATAA
PROTEIN sequence
Length: 542
VRYLKAFTKDLDFQGDIKEFSINDRVENILEGIIEEKPDVVAFSCYIWNMEFVNRLAELIKLVDPNIEILYGGPEVSYEGKEFLENHEGEYVIVGEGEKTFREFVLYKLGEGKIEDIKGLNYKRDGKVFENPKRPEMDMNELVFPYTYEEDINNKIVYYEASRGCPFKCKYCLSSVMHGVRFLDVERVKKELKYFMERGLKLVKFVDRTFNCNREYTVELLKYLSEQDTETRFHFEVAADLLTEEQIEILNNAPKGRFQLEVGVQTTNNEVLHNINRYITYENIKEKVLKVASGKNVMQHLDLIAGLPGEDLESFKKSFNDVHAIRPDEIQLGFLKLLKGSSMREEAEKWGIVYSPYAPYEIIRSKDISYEELLLLKKVEAMVDKYYNSCKFNNVIKFFLNIYDKPFDFYYDLAMFFEEKGNFKRSIGNVEYYKILLDFYLEKIGGEDEGLFKEVLKFDYLCFNKKRWLPDFLVRTITKEDEQNIKDSFDRQMPFKKAHIEKFEIDIINYIKNGEINFEPKYLIFDEMNFDYNSYVEVEMK*