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NECEvent2014_8_5_scaffold_1091_6

Organism: NECEvent2014_8_5_Escherichia_coli_50_14_partial

partial RP 22 / 55 MC: 3 BSCG 17 / 51 MC: 2 ASCG 9 / 38 MC: 2
Location: comp(3404..3799)

Top 3 Functional Annotations

Value Algorithm Source
Bacterial regulatory s, gntR family protein n=1 Tax=Escherichia coli DEC2C RepID=H4KNN3_ECOLX similarity UNIREF
DB: UNIREF100
  • Identity: 95.6
  • Coverage: 135.0
  • Bit_score: 251
  • Evalue 4.20e-64
Bacterial regulatory s, gntR family protein {ECO:0000313|EMBL:EHU37859.1}; TaxID=868140 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" so similarity UNIPROT
DB: UniProtKB
  • Identity: 95.6
  • Coverage: 135.0
  • Bit_score: 251
  • Evalue 5.80e-64
DNA-binding transcriptional repressor LldR similarity KEGG
DB: KEGG
  • Identity: 99.2
  • Coverage: 125.0
  • Bit_score: 247
  • Evalue 2.90e-63

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Taxonomy

Escherichia coli → Escherichia → Enterobacteriales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 396
ATGATTGTTTTACCCAGACGCCTGTCAGACGAGGTTGCCGATCGTGTGCGGGCGCTGATTGATGAAAAAAACCTGGAAGCGGGCATGAAGTTGCCCGCTGAGCGCCAACTGGCGATGCAACTCGGCGTATCACGTAATTCACTGCGCGAGGCGCTGGCAAAACTGGTGAGTGAAGGCGTGCTGCTCAGTCGACGCGGCGGCGGGACGTTTATTCGCTGGCGTCATGACACATGGTCGGAGCAAAACATCGTCCAGCCGCTAAAAACACTGATGGCCGATGATCCGGATTACAGTTTCGATATTCTGGAAGCCCGCTACGCCATTGAAGCCAGCACCGCATGGCATGCGGCAATGCGCGCCACACCTGGCGACAGCTTTGCTTTGAAGCAACGCTAA
PROTEIN sequence
Length: 132
MIVLPRRLSDEVADRVRALIDEKNLEAGMKLPAERQLAMQLGVSRNSLREALAKLVSEGVLLSRRGGGTFIRWRHDTWSEQNIVQPLKTLMADDPDYSFDILEARYAIEASTAWHAAMRATPGDSFALKQR*