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NECEvent2014_8_5_scaffold_743_14

Organism: NECEvent2014_8_5_Escherichia_coli_50_14_partial

partial RP 22 / 55 MC: 3 BSCG 17 / 51 MC: 2 ASCG 9 / 38 MC: 2
Location: 13433..13624

Top 3 Functional Annotations

Value Algorithm Source
DNA-binding protein HU n=1 Tax=Shigella dysenteriae RepID=UPI0003C73C08 similarity UNIREF
DB: UNIREF100
  • Identity: 100.0
  • Coverage: 64.0
  • Bit_score: 124
  • Evalue 2.90e-26
hupA; transcriptional regulator HU subunit alpha similarity KEGG
DB: KEGG
  • Identity: 100.0
  • Coverage: 64.0
  • Bit_score: 124
  • Evalue 8.10e-27
DNA-binding protein HU-&alpha {ECO:0000313|EMBL:EHU03572.1}; TaxID=868135 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escheric similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 64.0
  • Bit_score: 124
  • Evalue 4.00e-26

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Taxonomy

Escherichia coli → Escherichia → Enterobacteriales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 192
ATGAACAAGACTCAACTGATTGATGTAATTGCAGAGAAAGCAGAACTGTCCAAAACCCAGGCTAAAGCTGCTCTGGAGTCCACTCTGGCTGCAATTACTGAGTCTCTGAAAGAAGGCGATGCTGTACAACTGGTTGGTTTCGGTACCTTCAAAGTGAACCACCGCGCTGAGCGTACTGGCCGCAACCCGCAG
PROTEIN sequence
Length: 64
MNKTQLIDVIAEKAELSKTQAKAALESTLAAITESLKEGDAVQLVGFGTFKVNHRAERTGRNPQ