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NECEvent2014_8_5_scaffold_870_9

Organism: NECEvent2014_8_5_Escherichia_coli_50_14_partial

partial RP 22 / 55 MC: 3 BSCG 17 / 51 MC: 2 ASCG 9 / 38 MC: 2
Location: 8491..9162

Top 3 Functional Annotations

Value Algorithm Source
Uncharacterized HTH-type transcriptional regulator YbiH n=872 Tax=Bacteria RepID=YBIH_ECOLI similarity UNIREF
DB: UNIREF100
  • Identity: 100.0
  • Coverage: 223.0
  • Bit_score: 445
  • Evalue 2.60e-122
  • rbh
putative DNA-binding transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 100.0
  • Coverage: 223.0
  • Bit_score: 445
  • Evalue 7.20e-123
Transcriptional regulator, TetR family {ECO:0000313|EMBL:ESA62052.1}; TaxID=1268978 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 223.0
  • Bit_score: 445
  • Evalue 3.60e-122

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Taxonomy

Escherichia coli → Escherichia → Enterobacteriales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 672
ATGAATAATCCTGCCATGACAATCAAGGGTGAACAGGCGAAAAAACAGCTGATTGCTGCCGCACTGGCGCAGTTTGGTGAATATGGAATGAACGCCACCACTCGCGAGATAGCCGCCCAGGCCGGGCAGAATATCGCTGCCATCACCTACTACTTCGGTTCGAAAGAAGATTTGTACCTCGCCTGCGCCCAGTGGATTGCCGATTTTATTGGCGAGCAGTTCCGTCCGCATGCCGAGGAAGCCGAACGCTTGTTCGCGCAACCACAGCCTGATCGGGCTGCCATCCGTGAACTGATCCTTCGCGCCTGCAGGAACATGATTAAGCTGCTCACCCAGGATGACACCGTCAACCTCAGCAAGTTTATCTCCCGTGAGCAGCTCTCTCCCACGGCAGCCTACCACCTGGTGCACGAACAGGTGATTAGTCCGCTACACAGCCACCTGACACGCCTGATTGCCGCCTGGACCGGCTGCGACGCCAATGACACCCGCATGATCCTTCATACCCATGCGTTGATTGGTGAGATTCTGGCGTTCCGTCTTGGCAAAGAAACAATTCTGTTACGTACCGGCTGGACCGCGTTCGATGAAGAAAAGACCGAACTGATCAACCAGACGGTGACCTGTCATATCGACCTGATTTTGCAAGGATTATCGCAAAGGAGTTTGTAA
PROTEIN sequence
Length: 224
MNNPAMTIKGEQAKKQLIAAALAQFGEYGMNATTREIAAQAGQNIAAITYYFGSKEDLYLACAQWIADFIGEQFRPHAEEAERLFAQPQPDRAAIRELILRACRNMIKLLTQDDTVNLSKFISREQLSPTAAYHLVHEQVISPLHSHLTRLIAAWTGCDANDTRMILHTHALIGEILAFRLGKETILLRTGWTAFDEEKTELINQTVTCHIDLILQGLSQRSL*