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NECEvent2014_8_5_scaffold_927_13

Organism: NECEvent2014_8_5_Escherichia_coli_50_14_partial

partial RP 22 / 55 MC: 3 BSCG 17 / 51 MC: 2 ASCG 9 / 38 MC: 2
Location: comp(11134..11871)

Top 3 Functional Annotations

Value Algorithm Source
Integrase core domain protein n=29 Tax=Escherichia coli RepID=H4SX09_ECOLX similarity UNIREF
DB: UNIREF100
  • Identity: 85.9
  • Coverage: 234.0
  • Bit_score: 402
  • Evalue 3.60e-109
  • rbh
Integrase core domain protein {ECO:0000313|EMBL:KEN65343.1}; TaxID=1444116 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escheri similarity UNIPROT
DB: UniProtKB
  • Identity: 85.9
  • Coverage: 234.0
  • Bit_score: 402
  • Evalue 5.00e-109
transposase InsF similarity KEGG
DB: KEGG
  • Identity: 100.0
  • Coverage: 194.0
  • Bit_score: 400
  • Evalue 3.80e-109

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Taxonomy

Escherichia coli → Escherichia → Enterobacteriales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 738
ATGAAGTATGTCTTTATTGAAAAACATCAGGCTGAGTTCAGCATCAAAGCAATGTGCCGCGTGCTCCGGGTGGCCCGCAGCGGCTGGTATACGTGGTGTCAGCGGCGGACAAGGATAAGCACGCGTCAGCAGTTCCGCCAACACTGCGACAGCGTTGTCCTCGCGGCTTTTACCCGGTCAAAACAGCGTTACGGTGCCCCACGCCTGACGGATGAACTGCGTGCTCAGGGTTACCCCTTTAACGTAAAAACCGTGGCGGCAAGCCTGCGCCGTCAGGGACTGAGGGCAAAGGCCTCCCGGAAGTTCAGCCCGGTCAGCTACCGCGCACACGGCCTGCCTGTGTCAGAAAATCTGTTAGAGCAGGATTTTTACGCCAGTGGCCCGAACCAGAAGTGGGCAGGAGACATCACGTACTTACGTACAGATGAAGGCTGGCTGTATCTGGCAGTGGTCATTGACCTGTGGTCACGTGCCGTTATTGGCTGGTCAATGTCGCCACGCATGACGGCGCAACTGGCCTGCGATGCCCTGCAGATGGCGCTGTGGCGGCGTAAGAGGCCCCGGAACGTTATCGTTCACACGAAAGTGGAATGTATCCATGGAGAACACTTTATCAGCCGGGAAATAATGCGGGCAACGGTGTTTAATTATATCGAATGTGATTACAATCGGTGGCGGCGGTACAGTTGGTGTGGCGGCCTCAGTCCGAAACAATTTGAAAACAAGAACCTCGCTTAG
PROTEIN sequence
Length: 246
MKYVFIEKHQAEFSIKAMCRVLRVARSGWYTWCQRRTRISTRQQFRQHCDSVVLAAFTRSKQRYGAPRLTDELRAQGYPFNVKTVAASLRRQGLRAKASRKFSPVSYRAHGLPVSENLLEQDFYASGPNQKWAGDITYLRTDEGWLYLAVVIDLWSRAVIGWSMSPRMTAQLACDALQMALWRRKRPRNVIVHTKVECIHGEHFISREIMRATVFNYIECDYNRWRRYSWCGGLSPKQFENKNLA*