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NECEvent2014_8_5_scaffold_951_5

Organism: NECEvent2014_8_5_Escherichia_coli_50_14_partial

partial RP 22 / 55 MC: 3 BSCG 17 / 51 MC: 2 ASCG 9 / 38 MC: 2
Location: 3935..4300

Top 3 Functional Annotations

Value Algorithm Source
Transposase insC for insertion element IS2D n=4 Tax=Escherichia coli RepID=S1K7F6_ECOLX similarity UNIREF
DB: UNIREF100
  • Identity: 95.0
  • Coverage: 119.0
  • Bit_score: 218
  • Evalue 2.80e-54
hypothetical protein similarity KEGG
DB: KEGG
  • Identity: 95.0
  • Coverage: 119.0
  • Bit_score: 218
  • Evalue 7.80e-55
IS2 ORF1 {ECO:0000313|EMBL:ABF02955.1}; TaxID=373384 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Shigella.;" source="Shigella flexneri serotype 5b (s similarity UNIPROT
DB: UniProtKB
  • Identity: 95.0
  • Coverage: 119.0
  • Bit_score: 218
  • Evalue 3.90e-54

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Taxonomy

Shigella flexneri → Shigella → Enterobacteriales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 366
ATGATTGATGTCTTAGGGCAGGAGAAACGCAGACGGCGTACCATACAGGAAAATATCGCTATTGTTCAGCAGAGCTTTGAACCGAGAATGACGGTCTCCCTCGTTGCACGGCAACACGGTGTGGCAGCCAGCCAGTTATTTCTCTGGCGTAAGCAATACCAGGAAGGAAGTCTCACTGCTGTGGCTGCTGGAGAACAGGTTGTTCCGGCCTCTGAGCTTGCTGCCGCCATGAAGCAGATTAAAGAACTCCAGCGCCTGCTCGGTAAGAAAACGATGGAAAATGAACTCATTAAAGAAGCGGTTGAAGATGGGCGTGCAAAAAAGTGGATAACGCACGCGCCCTTATTGCCCGGGGATAGGGCGTAA
PROTEIN sequence
Length: 122
MIDVLGQEKRRRRTIQENIAIVQQSFEPRMTVSLVARQHGVAASQLFLWRKQYQEGSLTAVAAGEQVVPASELAAAMKQIKELQRLLGKKTMENELIKEAVEDGRAKKWITHAPLLPGDRA*