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NECEvent2014_8_5_scaffold_1576_10

Organism: NECEvent2014_8_5_Escherichia_coli_50_14_partial

partial RP 22 / 55 MC: 3 BSCG 17 / 51 MC: 2 ASCG 9 / 38 MC: 2
Location: comp(4668..5225)

Top 3 Functional Annotations

Value Algorithm Source
Transcriptional regulator, TetR family n=1 Tax=Escherichia coli H591 RepID=F4V9R7_ECOLX similarity UNIREF
DB: UNIREF100
  • Identity: 100.0
  • Coverage: 185.0
  • Bit_score: 369
  • Evalue 2.50e-99
  • rbh
Transcriptional regulator, TetR family {ECO:0000313|EMBL:EGI47847.1}; TaxID=656408 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source= similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 185.0
  • Bit_score: 369
  • Evalue 3.50e-99
TetR family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 78.8
  • Coverage: 184.0
  • Bit_score: 292
  • Evalue 6.50e-77

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Taxonomy

Escherichia coli → Escherichia → Enterobacteriales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 558
ATGTCCACCCATGACAGTCTGATTGAACTGACTGACACACTTATCCAGCAGAACGGTTACCAGGGGTTCAGCTATGCTGACCTGGCGGAGACGCTGGGTATCCGTAAAGCCAGCATTCACTACCATTTCCAGACAAAAACAGACCTGGGAATAGCCTACTGTGAATATAAAAAAGCCGGTTTTCTGGCGCTGGAAGCCACCCTGCAGCAGTTACCTGCCGGGAAAGCCCGCCTGAAGGGCTATATGGAGGCCTTTCTGGCCTGCGCGGACACCGGCCAGATGTGCGGGGTGTACGCCATGATGTCGGACTGTAACCTGTTTGAGCCTCCCCTGCAGGAGGCCGTTAACCGGTTGGCACAGACGGACCTGCGCATTCTGACGGCGGTCCTGCTGTCCGGAAAGGAAAGCGGAGAACTGTTTTTTTCTGCCCCGGCAGAAGATGTTGCTATGATTGTGGCCAGTTCGATAAAAGGCGCCCTGATGCTGAACCGCATACCGCCTCACGACGCCTGCATCCGCACGATGAAAGCGCTGGAGCAGTTGCTCTGCCGGGTCTGA
PROTEIN sequence
Length: 186
MSTHDSLIELTDTLIQQNGYQGFSYADLAETLGIRKASIHYHFQTKTDLGIAYCEYKKAGFLALEATLQQLPAGKARLKGYMEAFLACADTGQMCGVYAMMSDCNLFEPPLQEAVNRLAQTDLRILTAVLLSGKESGELFFSAPAEDVAMIVASSIKGALMLNRIPPHDACIRTMKALEQLLCRV*