ggKbase home page

NECEvent2014_8_5_scaffold_2135_4

Organism: NECEvent2014_8_5_Escherichia_coli_50_14_partial

partial RP 22 / 55 MC: 3 BSCG 17 / 51 MC: 2 ASCG 9 / 38 MC: 2
Location: comp(4234..4677)

Top 3 Functional Annotations

Value Algorithm Source
Putative permease yjcD n=1 Tax=Escherichia coli DEC11D RepID=H5HXP4_ECOLX similarity UNIREF
DB: UNIREF100
  • Identity: 99.3
  • Coverage: 147.0
  • Bit_score: 280
  • Evalue 9.40e-73
xanthine/uracil/vitamin C permease similarity KEGG
DB: KEGG
  • Identity: 99.3
  • Coverage: 147.0
  • Bit_score: 280
  • Evalue 2.60e-73
Putative permease yjcD {ECO:0000313|EMBL:EZJ47749.1}; TaxID=1444228 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia co similarity UNIPROT
DB: UniProtKB
  • Identity: 99.3
  • Coverage: 147.0
  • Bit_score: 280
  • Evalue 1.30e-72

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Escherichia coli → Escherichia → Enterobacteriales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 444
TCCATGAGCAGCGTTTTCTCTGGCCTGGTGGGTGCGGCTCCGGCAGCGGTATACATCGAGTCTGCGGTGGGTACGGCGGCGGGCGGTAAAACCGGTTTGACGGCTATCACCGTTGGCGTGCTGTTCCTCCTGATTCTGTTCCTCTCTCCGCTCTCTTACCTCGTTCCGGGGTATGCAACGGCTCCGGCGCTGATGTACGTTGGCCTGCTGATGCTGAGCAACGTGGCGAAAATCGACTTTGCTGATTTTGTTGATGCGATGGCGGGTCTGGTTACGGCTGTATTCATCGTGCTGACCTGTAACATCGTAACAGGCATCATGATCGGCTTCGCGACTCTGGTGATTGGTCGTCTGGTTTCCGGCGAATGGCGCAAGTTGAACATCGGTACGGTCGTTATCGCCGTGGCGCTGGTGACCTTCTATGCGGGTGGCTGGGCTATCTAA
PROTEIN sequence
Length: 148
SMSSVFSGLVGAAPAAVYIESAVGTAAGGKTGLTAITVGVLFLLILFLSPLSYLVPGYATAPALMYVGLLMLSNVAKIDFADFVDAMAGLVTAVFIVLTCNIVTGIMIGFATLVIGRLVSGEWRKLNIGTVVIAVALVTFYAGGWAI*