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NECEvent2014_8_5_scaffold_2191_5

Organism: NECEvent2014_8_5_Escherichia_coli_50_14_partial

partial RP 22 / 55 MC: 3 BSCG 17 / 51 MC: 2 ASCG 9 / 38 MC: 2
Location: 4198..4533

Top 3 Functional Annotations

Value Algorithm Source
rnd; ribonuclease D (EC:3.1.26.3) similarity KEGG
DB: KEGG
  • Identity: 100.0
  • Coverage: 112.0
  • Bit_score: 229
  • Evalue 4.10e-58
Ribonuclease D {ECO:0000256|HAMAP-Rule:MF_01899}; Short=RNase D {ECO:0000256|HAMAP-Rule:MF_01899};; EC=3.1.13.5 {ECO:0000256|HAMAP-Rule:MF_01899};; TaxID=1169376 species="Bacteria; Proteobacteria; Gam similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 112.0
  • Bit_score: 229
  • Evalue 2.00e-57
Ribonuclease D n=1 Tax=Escherichia coli 2730350 RepID=N2NDW1_ECOLX similarity UNIREF
DB: UNIREF100
  • Identity: 100.0
  • Coverage: 112.0
  • Bit_score: 229
  • Evalue 1.40e-57

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Taxonomy

Escherichia coli → Escherichia → Enterobacteriales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 336
ATGATTACCACGGACGATGCGCTGGCTTCTTTGTGTGAAGCCGTCCGTGCCTTTCCGGCGATAGCCCTGGATACTGAATTTGTTCGTACGCGCACTTATTACCCGCAGCTGGGGTTGATTCAACTTTTCGATGGCGAGCATCTGGCGCTAATCGATCCACTCGGGATCACCGACTGGTCACCGCTGAAAGCGATCCTGCGCGATCCGTCCATCACAAAATTTCTCCATGCAGGCAGTGAAGATCTGGAAGTGTTCCTCAATGTCTTTGGCGAATTACCACAACCCTTGATTGACACGCAAATCCTTGCTGCCTTCTGCGGACGCCCGATGTCATGG
PROTEIN sequence
Length: 112
MITTDDALASLCEAVRAFPAIALDTEFVRTRTYYPQLGLIQLFDGEHLALIDPLGITDWSPLKAILRDPSITKFLHAGSEDLEVFLNVFGELPQPLIDTQILAAFCGRPMSW